5FSD
1.75 A resolution 2,5-dihydroxybenzensulfonate inhibited Sporosarcina pasteurii urease
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | UREASE SUBUNIT GAMMA | polymer | 100 | 11134.9 | 1 | UniProt (P41022) Pfam (PF00547) In PDB | SPOROSARCINA PASTEURII | UREA AMIDOHYDROLASE SUBUNIT GAMMA |
| 2 | B | UREASE SUBUNIT BETA | polymer | 126 | 13975.5 | 1 | UniProt (P41021) Pfam (PF00699) In PDB | SPOROSARCINA PASTEURII | UREA AMIDOHYDROLASE SUBUNIT BETA |
| 3 | C | UREASE SUBUNIT ALPHA | polymer | 570 | 61575.6 | 1 | UniProt (P41020) Pfam (PF00449) Pfam (PF01979) In PDB | SPOROSARCINA PASTEURII | UREA AMIDOHYDROLASE SUBUNIT ALPHA |
| 4 | A, B, C | 1,2-ETHANEDIOL | non-polymer | 62.1 | 16 | Chemie (EDO) | |||
| 5 | C, A, B | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 6 | C | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 7 | C | HYDROXIDE ION | non-polymer | 17.0 | 1 | Chemie (OH) | |||
| 8 | C | 2,5-dihydroxybenzenesulfonic acid | non-polymer | 190.2 | 2 | Chemie (DBX) | |||
| 9 | water | water | 18.0 | 640 | Chemie (HOH) |
Sequence modifications
A: 1 - 100 (UniProt: P41022)
C: 1 - 570 (UniProt: P41020)
| PDB | External Database | Details |
|---|---|---|
| Ala 20 | Leu 20 | conflict |
| Lys 22 | Arg 22 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Gln 19 | Arg 19 | conflict |
| Trp 28 | Gly 28 | conflict |
| Ile 29 | - | insertion |
| Thr 36 | Tyr 35 | conflict |
| Thr 37 | Tyr 36 | conflict |
| Tyr 38 | Leu 37 | conflict |
| Ala 42 | Val 41 | conflict |
| Leu 263 | Val 262 | conflict |
| Ala 403 | Leu 402 | conflict |
| Ile 420 | Met 419 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 86686.1 | |
| Non-Polymers* | Number of molecules | 27 |
| Total formula weight | 2084.2 | |
| All* | Total formula weight | 88770.3 |
