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5FPU

Crystal structure of human JARID1B in complex with GSKJ1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
LYSINE-SPECIFIC DEMETHYLASE 5Bpolymer48155457.61UniProt (Q9UGL1)
Pfam (PF02375)
Pfam (PF02373)
Pfam (PF21323)
Pfam (PF02928)
HOMO SAPIENS (HUMAN)
2B, C
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
3D
(A)
3-[[2-pyridin-2-yl-6-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)pyrimidin-4-yl]amino]propanoic acidnon-polymer389.41Chemie (K0I)
4E, F
(A)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
5G, H
(A)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
6I
(A)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.31Chemie (EPE)
7J, K, L, M, N
(A)
1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
8O
(A)
waterwater18.0244Chemie (HOH)
Sequence modifications
A: 26 - 369 (UniProt: Q9UGL1)
PDBExternal DatabaseDetails
Ser -1-expression tag
Met 0-expression tag
A: 374 - 772 (UniProt: Q9UGL1)
PDBExternal DatabaseDetails
Gly 370-linker
Gly 371-linker
Gly 372-linker
Gly 373-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight55457.6
Non-Polymers*Number of molecules13
Total formula weight1368.7
All*Total formula weight56826.3
*Water molecules are not included.

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PDB entries from 2024-12-25

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