Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5FBB

S1 nuclease from Aspergillus oryzae in complex with phosphate and adenosine 5'-monophosphate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Nuclease S1polymer26729083.72UniProt (P24021)
Pfam (PF02265)
Aspergillus oryzae RIB40 (Yellow koji mold)Deoxyribonuclease S1,Endonuclease S1,Single-stranded-nucleate endonuclease
2C, D, E, R, S...
(A, B)
ZINC IONnon-polymer65.46Chemie (ZN)
3F, G
(A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
4H, U
(A, B)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
5I, V
(A, B)
ADENOSINE MONOPHOSPHATEnon-polymer347.22Chemie (AMP)
6J, K, W
(A, B)
SODIUM IONnon-polymer23.03Chemie (NA)
7L, M, N, X, Y
(A, B)
CALCIUM IONnon-polymer40.15Chemie (CA)
8AA, O, P, Z
(B, A)
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.24Chemie (BTB)
9Q
(A)
2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLnon-polymer208.31Chemie (ETE)
10BA, CA
(A, B)
waterwater18.0439Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight58167.3
Non-Polymers*Number of molecules25
Total formula weight3033.8
All*Total formula weight61201.1
*Water molecules are not included.

242842

PDB entries from 2025-10-08

PDB statisticsPDBj update infoContact PDBjnumon