5F9A
Blood group antigen binding adhesin BabA of Helicobacter pylori strain P436 in complex with blood group H Lewis b hexasaccharide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Adhesin binding fucosylated histo-blood group antigen,Adhesin,Adhesin binding fucosylated histo-blood group antigen | polymer | 463 | 48900.7 | 1 | UniProt (O52269) UniProt (Q6DT10) Pfam (PF18304) In PDB | Helicobacter pylori | |
2 | C | Nanobody Nb-ER19 | polymer | 120 | 13260.9 | 1 | Lama glama (Llama) | ||
3 | B | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose | branched | 999.9 | 1 | In PDB GlyTouCan (G30212HV) | |||
4 | water | water | 18.0 | 45 | Chemie (HOH) |
Sequence modifications
A: 25 - 180 (UniProt: O52269)
A: 181 - 250 (UniProt: Q6DT10)
A: 251 - 457 (UniProt: O52269)
PDB | External Database | Details |
---|---|---|
Ala 3 | - | expression tag |
Ser 4 | - | expression tag |
Trp 5 | - | expression tag |
Ser 6 | - | expression tag |
His 7 | - | expression tag |
Pro 8 | - | expression tag |
Gln 9 | - | expression tag |
Phe 10 | - | expression tag |
Glu 11 | - | expression tag |
Lys 12 | - | expression tag |
Ser 13 | - | expression tag |
Gly 14 | - | expression tag |
Gly 15 | - | expression tag |
Gly 16 | - | expression tag |
Gly 17 | - | expression tag |
Gly 18 | - | expression tag |
Leu 19 | - | expression tag |
Val 20 | - | expression tag |
Pro 21 | - | expression tag |
Arg 22 | - | expression tag |
Gly 23 | - | expression tag |
Ser 24 | - | expression tag |
A: 251 - 457 (UniProt: O52269)
PDB | External Database | Details |
---|---|---|
Gly 458 | - | expression tag |
Ser 459 | - | expression tag |
His 460 | - | expression tag |
His 461 | - | expression tag |
His 462 | - | expression tag |
His 463 | - | expression tag |
His 464 | - | expression tag |
His 465 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 62161.5 | |
Branched | Number of molecules | 1 |
Total formula weight | 999.9 | |
All* | Total formula weight | 63161.4 |