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5F6L

The crystal structure of MLL1 (N3861I/Q3867L) in complex with RbBP5 and Ash2L

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(J)
Retinoblastoma-binding protein 5polymer273255.31UniProt (Q15291)Homo sapiens (Human)RBBP-5,Retinoblastoma-binding protein RBQ-3
2B
(B)
Set1/Ash2 histone methyltransferase complex subunit ASH2polymer18420597.41UniProt (Q9UBL3)
Pfam (PF00622)
Homo sapiens (Human)ASH2-like protein
3C
(A)
Histone-lysine N-methyltransferase 2Apolymer15818243.21UniProt (Q03164)
Pfam (PF00856)
Homo sapiens (Human)Lysine N-methyltransferase 2A,ALL-1,CXXC-type zinc finger protein 7,Myeloid/lymphoid or mixed-lineage leukemia,Myeloid/lymphoid or mixed-lineage leukemia protein 1,Trithorax-like protein,Zinc finger protein HRX
4D
(A)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
5E
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
6F, G, H
(J, B, A)
waterwater18.0361Chemie (HOH)
Sequence modifications
B: 286 - 438 (UniProt: Q9UBL3)
PDBExternal DatabaseDetails
Ser 285-expression tag
B: 445 - 504 (UniProt: Q9UBL3)
PDBExternal DatabaseDetails
Ile 439-linker
Ser 440-linker
Gly 441-linker
Arg 442-linker
Gly 443-linker
Ser 444-linker
A: 3813 - 3969 (UniProt: Q03164)
PDBExternal DatabaseDetails
Ser 3812-expression tag
Ile 3861Asn 3861engineered mutation
Leu 3867Gln 3867engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight42095.9
Non-Polymers*Number of molecules2
Total formula weight449.8
All*Total formula weight42545.7
*Water molecules are not included.

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PDB entries from 2024-10-30

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