5EW6
Structure of ligand binding region of uPARAP at pH 7.4 without calcium
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | C-type mannose receptor 2 | polymer | 492 | 55881.8 | 1 | UniProt (Q9UBG0) Pfam (PF00040) Pfam (PF00059) In PDB | Homo sapiens (Human) | uPARAP |
2 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 627.6 | 1 | In PDB BIRD (PRD_900017) GlyTouCan (G47362BJ) | triacetyl-beta-chitotriose | ||
3 | A | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
4 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
5 | A | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
6 | water | water | 18.0 | 69 | Chemie (HOH) |
Sequence modifications
A: 31 - 510 (UniProt: Q9UBG0)
PDB | External Database | Details |
---|---|---|
Arg 29 | - | expression tag |
Ser 30 | - | expression tag |
Ile 43 | Val 43 | variant |
Thr 511 | - | expression tag |
Arg 512 | - | expression tag |
Thr 513 | - | expression tag |
Gly 514 | - | expression tag |
His 515 | - | expression tag |
His 516 | - | expression tag |
His 517 | - | expression tag |
His 518 | - | expression tag |
His 519 | - | expression tag |
His 520 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 55881.8 | |
Branched | Number of molecules | 1 |
Total formula weight | 627.6 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 505.5 | |
All* | Total formula weight | 57014.9 |