5ELB
Cholera toxin classical B-pentamer in complex with Lewis-y
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... (A, B, C, D, E...) | Cholera enterotoxin B subunit | polymer | 103 | 11623.3 | 10 | UniProt (Q57193) Pfam (PF01376) | Vibrio cholerae O1 | Cholera enterotoxin subunit B,Cholera toxin B protein (CTB),Cholera toxin B subunit,Cholera toxin beta subunit,Cholera toxin subunit B,Cholerae toxin B subunit,CtxB |
2 | K, L, M, N, O... (K, L, M, N, O...) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose | branched | 675.6 | 8 | In PDB BIRD (PRD_900124) GlyTouCan (G82236PZ) | Lewis Y antigen, alpha anomer | ||
3 | S, T (S, T) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-3)-alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 878.8 | 2 | ||||
4 | AA, EA, GA, JA, NA... (B, C, D, E, A) | CALCIUM ION | non-polymer | 40.1 | 10 | Chemie (CA) | |||
5 | CA, CB, DB, FB, HA... (B, G, H, I, C...) | beta-D-galactopyranose | non-polymer | 180.2 | 10 | Chemie (GAL) | |||
6 | BB, DA, EB, GB, IA... (G, B, H, I, C...) | alpha-D-galactopyranose | non-polymer | 180.2 | 10 | Chemie (GLA) | |||
7 | BA, FA, KA, LA, MA... (B, C, D, E, A) | BICINE | non-polymer | 163.2 | 10 | Chemie (BCN) | |||
8 | AB (G) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
9 | JB, KB, LB, MB, NB... (A, B, C, D, E...) | water | water | 18.0 | 1550 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 116232.7 | |
Branched | Number of molecules | 10 |
Total formula weight | 7162.7 | |
Non-Polymers* | Number of molecules | 41 |
Total formula weight | 5741.7 | |
All* | Total formula weight | 129137.1 |