5EB5
The crystal structure of almond HNL, PaHNL5 V317A, in complex with benzyl alcohol
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Hnl isoenzyme 5 | polymer | 532 | 57903.2 | 2 | UniProt (Q7XJE8) Pfam (PF00732) Pfam (PF05199) UniProt (by SIFTS) (O24243) | Prunus dulcis (Almond) | Hydroxynitrile lyase |
| 2 | C, D, E, F (C, D, E, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 3 | G, L (A, B) | FLAVIN-ADENINE DINUCLEOTIDE | non-polymer | 785.5 | 2 | Chemie (FAD) | |||
| 4 | H, I, J, M (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 5 | K, N (A, B) | phenylmethanol | non-polymer | 108.1 | 2 | Chemie (010) | |||
| 6 | O, P (A, B) | water | water | 18.0 | 88 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 532 (UniProt: Q7XJE8)
| PDB | External Database | Details |
|---|---|---|
| Ala 317 | Val 344 | engineered mutation |
| Val 360 | Unk 387 | conflict |
| Asn 496 | Unk 523 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 115806.3 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1697.6 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 2672.2 | |
| All* | Total formula weight | 120176.2 |
