5DZV
Protocadherin alpha 7 extracellular cadherin domains 1-5
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Protein Pcdha7 | polymer | 539 | 59245.2 | 2 | UniProt (Q91Y13) Pfam (PF08266) Pfam (PF00028) In PDB | Mus musculus (Mouse) | Protocadherin alpha 7 |
2 | C, D | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 2 | In PDB GlyTouCan (G86851RC) | |||
3 | E | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB GlyTouCan (G82348BZ) | |||
4 | F | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
5 | B, A | CALCIUM ION | non-polymer | 40.1 | 24 | Chemie (CA) | |||
6 | B, A | alpha-D-mannopyranose | non-polymer | 180.2 | 6 | Chemie (MAN) | |||
7 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
8 | water | water | 18.0 | 12 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 531 (UniProt: Q91Y13)
PDB | External Database | Details |
---|---|---|
His 532 | - | expression tag |
His 533 | - | expression tag |
His 534 | - | expression tag |
His 535 | - | expression tag |
His 536 | - | expression tag |
His 537 | - | expression tag |
His 538 | - | expression tag |
His 539 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 118490.5 | |
Branched | Number of molecules | 4 |
Total formula weight | 2378.2 | |
Non-Polymers* | Number of molecules | 31 |
Total formula weight | 2264.0 | |
All* | Total formula weight | 123132.7 |