5DHR
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D | NAD kinase 1 | polymer | 272 | 31045.3 | 4 | UniProt (Q8Y8D7) Pfam (PF01513) Pfam (PF20143) In PDB | Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) | ATP-dependent NAD kinase |
| 2 | A, B | CITRIC ACID | non-polymer | 192.1 | 2 | Chemie (CIT) | |||
| 3 | A, B, C, D | 5'-azido-8-[(2-{[2-(1H-benzimidazol-2-yl)ethyl]amino}-2-oxoethyl)sulfanyl]-5'-deoxyadenosine | non-polymer | 525.5 | 4 | Chemie (5AJ) | |||
| 4 | C | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 5 | water | water | 18.0 | 206 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 264 (UniProt: Q8Y8D7)
| PDB | External Database | Details |
|---|---|---|
| Leu 265 | - | expression tag |
| Glu 266 | - | expression tag |
| His 267 | - | expression tag |
| His 268 | - | expression tag |
| His 269 | - | expression tag |
| His 270 | - | expression tag |
| His 271 | - | expression tag |
| His 272 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 124181.1 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 2578.5 | |
| All* | Total formula weight | 126759.6 |
