5DHP
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | NAD kinase 1 | polymer | 272 | 31045.3 | 4 | UniProt (Q8Y8D7) Pfam (PF01513) Pfam (PF20143) In PDB | Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) | ATP-dependent NAD kinase |
2 | A, B, D | CITRIC ACID | non-polymer | 192.1 | 3 | Chemie (CIT) | |||
3 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
4 | A, B, C, D | 8-({2-oxo-2-[(2-phenylethyl)amino]ethyl}sulfanyl)adenosine | non-polymer | 460.5 | 4 | Chemie (5AQ) | |||
5 | water | water | 18.0 | 285 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 264 (UniProt: Q8Y8D7)
PDB | External Database | Details |
---|---|---|
Leu 265 | - | expression tag |
Glu 266 | - | expression tag |
His 267 | - | expression tag |
His 268 | - | expression tag |
His 269 | - | expression tag |
His 270 | - | expression tag |
His 271 | - | expression tag |
His 272 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 124181.1 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 2510.5 | |
All* | Total formula weight | 126691.6 |