5D76
The crystal structure of Ly7917 with the hydrolyzing product of MDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Putative phage lysin | polymer | 273 | 29354.1 | 2 | UniProt (M1PKZ3) | Streptococcus phage phi7917 (Streptococcus suis phage phi7917) | lysin |
| 2 | C, D (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 3 | E, F (A, B) | L-alanyl-D-alpha-glutamine | non-polymer | 217.2 | 2 | Chemie (58B) | |||
| 4 | G, H (A, B) | water | water | 18.0 | 25 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 245 (UniProt: M1PKZ3)
| PDB | External Database | Details |
|---|---|---|
| Met -27 | - | expression tag |
| Gly -26 | - | expression tag |
| Ser -25 | - | expression tag |
| His -24 | - | expression tag |
| His -23 | - | expression tag |
| His -22 | - | expression tag |
| His -21 | - | expression tag |
| His -20 | - | expression tag |
| His -19 | - | expression tag |
| His -18 | - | expression tag |
| His -17 | - | expression tag |
| Gly -16 | - | expression tag |
| Ser -15 | - | expression tag |
| Asp -14 | - | expression tag |
| Tyr -13 | - | expression tag |
| Asp -12 | - | expression tag |
| Ile -11 | - | expression tag |
| Pro -10 | - | expression tag |
| Thr -9 | - | expression tag |
| Thr -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Asn -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Tyr -4 | - | expression tag |
| Phe -3 | - | expression tag |
| Asn -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 58708.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 505.4 | |
| All* | Total formula weight | 59213.6 |






