5D76

The crystal structure of Ly7917 with the hydrolyzing product of MDP

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B	Putative phage lysin	polymer	273	29354.1	2	UniProt (M1PKZ3) Pfam (PF05257) Pfam (PF08460) In PDB	Streptococcus phage phi7917 (Streptococcus suis phage phi7917)	lysin
2	A	CHLORIDE ION	non-polymer		35.5	2	Chemie (CL)
3	A, B	L-alanyl-D-alpha-glutamine	non-polymer		217.2	2	Chemie (58B)
4		water	water		18.0	25	Chemie (HOH)

Sequence modifications

A, B: 1 - 245 (UniProt: M1PKZ3)

PDB	External Database	Details
Met -27	-	expression tag
Gly -26	-	expression tag
Ser -25	-	expression tag
His -24	-	expression tag
His -23	-	expression tag
His -22	-	expression tag
His -21	-	expression tag
His -20	-	expression tag
His -19	-	expression tag
His -18	-	expression tag
His -17	-	expression tag
Gly -16	-	expression tag
Ser -15	-	expression tag
Asp -14	-	expression tag
Tyr -13	-	expression tag
Asp -12	-	expression tag
Ile -11	-	expression tag
Pro -10	-	expression tag
Thr -9	-	expression tag
Thr -8	-	expression tag
Glu -7	-	expression tag
Asn -6	-	expression tag
Leu -5	-	expression tag
Tyr -4	-	expression tag
Phe -3	-	expression tag
Asn -2	-	expression tag
Gly -1	-	expression tag
Ser 0	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	58708.2
Non-Polymers*	Number of molecules	4
	Total formula weight	505.4
All*	Total formula weight	59213.6

*Water molecules are not included.