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5CVK

Structure of Xoo1075, a peptide deformyase from Xanthomonas oryzae pv. oryze, in complex with fragment 493

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Peptide deformylasepolymer17119097.71UniProt (Q5H3Z2)
Pfam (PF01327)
Xanthomonas oryzae pv. oryzae KACC10331PDF,Polypeptide deformylase
2B, C, D, E, I
(A)
CADMIUM IONnon-polymer112.45Chemie (CD)
3F
(A)
ethyl N-[(5-methylthiophen-3-yl)carbonyl]glycinatenon-polymer227.31Chemie (56E)
4G
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
5H
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
6J
(A)
waterwater18.0179Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight19097.7
Non-Polymers*Number of molecules8
Total formula weight871.4
All*Total formula weight19969.0
*Water molecules are not included.

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PDB entries from 2026-02-04

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