5CTD
Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment a2a1a1 of type I collagen
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain | polymer | 71 | 7161.6 | 1 | UniProt (P02452) UniProt (P20849) | Homo sapiens (Human) | Alpha-1 type I collagen |
| 2 | B (B) | Collagen alpha-2(I) chain,Collagen alpha-2(IX) chain | polymer | 71 | 6895.7 | 1 | UniProt (P08123) UniProt (Q14055) Pfam (PF01391) | Homo sapiens (Human) | Alpha-2 type I collagen |
| 3 | C (C) | Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain | polymer | 72 | 6999.0 | 1 | UniProt (P02452) UniProt (Q14050) | Homo sapiens (Human) | Alpha-1 type I collagen |
| 4 | D, E, F (A, B, C) | water | water | 18.0 | 194 | Chemie (HOH) |
Sequence modifications
A: 15 - 26 (UniProt: P02452)
A: 36 - 71 (UniProt: P20849)
B: 15 - 26 (UniProt: P08123)
B: 36 - 71 (UniProt: Q14055)
C: 15 - 26 (UniProt: P02452)
C: 36 - 72 (UniProt: Q14050)
| PDB | External Database | Details |
|---|---|---|
| Gly 1 | - | expression tag |
| Ser 2 | - | expression tag |
| Gly 3 | - | expression tag |
| Pro 4 | - | expression tag |
| Pro 5 | - | expression tag |
| Gly 6 | - | expression tag |
| Pro 7 | - | expression tag |
| Pro 8 | - | expression tag |
| Gly 9 | - | expression tag |
| Pro 10 | - | expression tag |
| Pro 11 | - | expression tag |
| Gly 12 | - | expression tag |
| Pro 13 | - | expression tag |
| Pro 14 | - | expression tag |
| Gly 27 | - | linker |
| Pro 28 | - | linker |
| Pro 29 | - | linker |
| Gly 30 | - | linker |
| Pro 31 | - | linker |
| Pro 32 | - | linker |
| Gly 33 | - | linker |
| Pro 34 | - | linker |
| Pro 35 | - | linker |
B: 15 - 26 (UniProt: P08123)
| PDB | External Database | Details |
|---|---|---|
| Gly 1 | - | expression tag |
| Ser 2 | - | expression tag |
| Gly 3 | - | expression tag |
| Pro 4 | - | expression tag |
| Pro 5 | - | expression tag |
| Gly 6 | - | expression tag |
| Pro 7 | - | expression tag |
| Pro 8 | - | expression tag |
| Gly 9 | - | expression tag |
| Pro 10 | - | expression tag |
| Pro 11 | - | expression tag |
| Gly 12 | - | expression tag |
| Pro 13 | - | expression tag |
| Pro 14 | - | expression tag |
| Gly 27 | - | linker |
| Pro 28 | - | linker |
| Pro 29 | - | linker |
| Gly 30 | - | linker |
| Pro 31 | - | linker |
| Pro 32 | - | linker |
| Gly 33 | - | linker |
| Pro 34 | - | linker |
| Pro 35 | - | linker |
C: 15 - 26 (UniProt: P02452)
| PDB | External Database | Details |
|---|---|---|
| Gly 1 | - | expression tag |
| Ser 2 | - | expression tag |
| Gly 3 | - | expression tag |
| Pro 4 | - | expression tag |
| Pro 5 | - | expression tag |
| Gly 6 | - | expression tag |
| Pro 7 | - | expression tag |
| Pro 8 | - | expression tag |
| Gly 9 | - | expression tag |
| Pro 10 | - | expression tag |
| Pro 11 | - | expression tag |
| Gly 12 | - | expression tag |
| Pro 13 | - | expression tag |
| Pro 14 | - | expression tag |
| Gly 27 | - | linker |
| Pro 28 | - | linker |
| Pro 29 | - | linker |
| Gly 30 | - | linker |
| Pro 31 | - | linker |
| Pro 32 | - | linker |
| Gly 33 | - | linker |
| Pro 34 | - | linker |
| Pro 35 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 21056.4 | |
| All* | Total formula weight | 21056.4 |
