5CPW
Crystal structure of murine polyomavirus PTA strain VP1 in complex with the GT1a glycan
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (A, B, C, D, E) | VP1 | polymer | 284 | 31630.7 | 5 | UniProt (Q76TX8) Pfam (PF00718) UniProt (by SIFTS) (P49302) | Murine polyomavirus | |
| 2 | F, G, H (F, G, H) | N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose | branched | 1128.0 | 3 | In PDB GlyTouCan (G64262FG) | |||
| 3 | I, J (I, J) | N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose | branched | 1419.3 | 2 | In PDB GlyTouCan (G65471CD) | |||
| 4 | K, L, M, N, O... (A, B, C, D, E) | GLYCEROL | non-polymer | 92.1 | 8 | Chemie (GOL) | |||
| 5 | S, T, U, V, W (A, B, C, D, E) | water | water | 18.0 | 1795 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 158153.6 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 6222.5 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 736.8 | |
| All* | Total formula weight | 165112.9 |
