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5CCR

Human Cyclophilin D Complexed with Inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Peptidyl-prolyl cis-trans isomerase F, mitochondrialpolymer16517783.31UniProt (P30405)
Pfam (PF00160)
Homo sapiens (Human)PPIase F,Cyclophilin D,CypD,Cyclophilin F,Mitochondrial cyclophilin,CyP-M,Rotamase F
2B, C
(A)
POTASSIUM IONnon-polymer39.12Chemie (K)
3D
(A)
FORMIC ACIDnon-polymer46.01Chemie (FMT)
4E
(A)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
5F, G
(A)
TRIETHYLENE GLYCOLnon-polymer150.22Chemie (PGE)
6H
(A)
ethyl N-[(4-aminobenzyl)carbamoyl]-L-methioninatenon-polymer325.41Chemie (4ZT)
7I
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
8J
(A)
waterwater18.0120Chemie (HOH)
Sequence modifications
A: 2 - 165 (UniProt: P30405)
PDBExternal DatabaseDetails
Met 1-expression tag
Ile 133Lys 175engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight17783.3
Non-Polymers*Number of molecules8
Total formula weight1050.3
All*Total formula weight18833.7
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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