5CCG
Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, G | Vesicle-associated membrane protein 2 | polymer | 63 | 7231.1 | 2 | UniProt (P63045) Pfam (PF00957) In PDB | Rattus norvegicus (Rat) | VAMP-2,Synaptobrevin-2 |
2 | B, H | Syntaxin-1A | polymer | 67 | 7838.0 | 2 | UniProt (P32851) Pfam (PF05739) In PDB | Rattus norvegicus (Rat) | Neuron-specific antigen HPC-1,Synaptotagmin-associated 35 kDa protein,P35A |
3 | C, I | Synaptosomal-associated protein 25 | polymer | 77 | 9030.1 | 2 | UniProt (P60881) In PDB | Rattus norvegicus (Rat) | SNAP-25,Super protein,SUP,Synaptosomal-associated 25 kDa protein |
4 | D, J | Synaptosomal-associated protein 25 | polymer | 65 | 7471.4 | 2 | UniProt (P60881) In PDB | Rattus norvegicus (Rat) | SNAP-25,Super protein,SUP,Synaptosomal-associated 25 kDa protein |
5 | E, F, K | Synaptotagmin-1 | polymer | 281 | 32247.2 | 3 | UniProt (P21707) Pfam (PF00168) In PDB | Rattus norvegicus (Rat) | Synaptotagmin I,SytI,p65 |
6 | K, A, C, D, E... | CALCIUM ION | non-polymer | 40.1 | 19 | Chemie (CA) | |||
7 | water | water | 18.0 | 18 | Chemie (HOH) |
Sequence modifications
A, G: 28 - 89 (UniProt: P63045)
B, H: 191 - 256 (UniProt: P32851)
D, J: 141 - 204 (UniProt: P60881)
PDB | External Database | Details |
---|---|---|
Gly 27 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 190 | - | initiating methionine |
PDB | External Database | Details |
---|---|---|
Met 140 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 159882.6 | |
Non-Polymers* | Number of molecules | 19 |
Total formula weight | 761.5 | |
All* | Total formula weight | 160644.1 |