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5CCG

Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, GVesicle-associated membrane protein 2polymer637231.12UniProt (P63045)
Pfam (PF00957)
In PDB
Rattus norvegicus (Rat)VAMP-2,Synaptobrevin-2
2B, HSyntaxin-1Apolymer677838.02UniProt (P32851)
Pfam (PF05739)
In PDB
Rattus norvegicus (Rat)Neuron-specific antigen HPC-1,Synaptotagmin-associated 35 kDa protein,P35A
3C, ISynaptosomal-associated protein 25polymer779030.12UniProt (P60881)
In PDB
Rattus norvegicus (Rat)SNAP-25,Super protein,SUP,Synaptosomal-associated 25 kDa protein
4D, JSynaptosomal-associated protein 25polymer657471.42UniProt (P60881)
In PDB
Rattus norvegicus (Rat)SNAP-25,Super protein,SUP,Synaptosomal-associated 25 kDa protein
5E, F, KSynaptotagmin-1polymer28132247.23UniProt (P21707)
Pfam (PF00168)
In PDB
Rattus norvegicus (Rat)Synaptotagmin I,SytI,p65
6K, A, C, D, E...CALCIUM IONnon-polymer40.119Chemie (CA)
7waterwater18.018Chemie (HOH)
Sequence modifications
A, G: 28 - 89 (UniProt: P63045)
PDBExternal DatabaseDetails
Gly 27-expression tag
B, H: 191 - 256 (UniProt: P32851)
PDBExternal DatabaseDetails
Met 190-initiating methionine
D, J: 141 - 204 (UniProt: P60881)
PDBExternal DatabaseDetails
Met 140-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight159882.6
Non-Polymers*Number of molecules19
Total formula weight761.5
All*Total formula weight160644.1
*Water molecules are not included.

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PDB entries from 2024-05-01

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