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5C4G

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta with the inhibitor BQR695 in complex with GDP loaded Rab11

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
Ras-related protein Rab-11Apolymer21924691.81UniProt (P62491)
Pfam (PF00071)
Homo sapiens (Human)Rab-11,YL8
2B
(E)
Phosphatidylinositol 4-kinase betapolymer52960683.81UniProt (Q9UBF8)
Pfam (PF21245)
Pfam (PF00454)
Homo sapiens (Human)PtdIns 4-kinase beta,NPIK,PI4K92
3C
(B)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
4D
(B)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
5E, F
(E)
SULFATE IONnon-polymer96.12Chemie (SO4)
6G
(E)
N~2~-[7-(3,4-dimethoxyphenyl)quinoxalin-2-yl]-N-methylglycinamidenon-polymer352.41Chemie (BQR)
Sequence modifications
B: 1 - 216 (UniProt: P62491)
PDBExternal DatabaseDetails
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Leu 70Gln 70engineered mutation
E: 121 - 287 (UniProt: Q9UBF8)
PDBExternal DatabaseDetails
Gly 117-expression tag
Ser 118-expression tag
His 119-expression tag
Met 120-expression tag
E: 288 - 507 (UniProt: Q9UBF8)
PDBExternal DatabaseDetails
Ala 294Ser 294engineered mutation
E: 508 - 784 (UniProt: Q9UBF8)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight85375.7
Non-Polymers*Number of molecules5
Total formula weight1012.0
All*Total formula weight86387.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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