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5C11

Crystal Structure of Jarid1a PHD finger bound to histone H3C4me3 peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Lysine-specific demethylase 5Apolymer525802.51UniProt (P29375)Homo sapiens (Human)Histone demethylase JARID1A,Jumonji/ARID domain-containing protein 1A,Retinoblastoma-binding protein 2,RBBP-2
2B
(B)
H3 peptidepolymer101190.41UniProt (by SIFTS) (P68431)synthetic construct
3C, D
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
A: 2 - 52 (UniProt: P29375)
PDBExternal DatabaseDetails
Ser 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight6992.9
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight7123.7
*Water molecules are not included.

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PDB entries from 2025-08-06

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