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5BYR

Semisynthetic [FeFe]-hydrogenase CpI with propane-dithiolato-bridged [2Fe] cofactor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BIron hydrogenase 1polymer58465111.42UniProt (P29166)
Pfam (PF13510)
Pfam (PF12838)
Pfam (PF02906)
Pfam (PF02256)
In PDB
Clostridium pasteurianumCpI,Fe-only hydrogenase,[Fe] hydrogenase
2A, BIRON/SULFUR CLUSTERnon-polymer351.68Chemie (SF4)
3A, BFE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
4A, Bbis(cyanido-kappaC)(dicarbonyl)-mu-(oxomethylidene)[mu-propane-1,3-bis(thiolate)-1kappa~2~S~1~,S~3~:2kappa~2~S~1~,S~3~] diiron(2+)non-polymer354.02Chemie (4WW)
5A, BMAGNESIUM IONnon-polymer24.35Chemie (MG)
6AGLYCEROLnon-polymer92.12Chemie (GOL)
7waterwater18.0843Chemie (HOH)
Sequence modifications
A, B: 1 - 574 (UniProt: P29166)
PDBExternal DatabaseDetails
Ser 575-expression tag
Ala 576-expression tag
Trp 577-expression tag
Ser 578-expression tag
His 579-expression tag
Pro 580-expression tag
Gln 581-expression tag
Phe 582-expression tag
Glu 583-expression tag
Lys 584-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight130222.8
Non-Polymers*Number of molecules19
Total formula weight4178.4
All*Total formula weight134401.2
*Water molecules are not included.

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PDB entries from 2024-04-24

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