5BXP
LNBase in complex with LNB-LOGNAc
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Lacto-N-biosidase | polymer | 644 | 71892.2 | 2 | UniProt (B3TLD6) Pfam (PF02838) Pfam (PF00728) Pfam (PF14200) In PDB | Bifidobacterium bifidum JCM 1254 | |
2 | C, D | beta-D-galactopyranose-(1-3)-N-acetylglucosaminono-1,5-lactone (Z)-oxime | branched | 396.3 | 2 | In PDB GlyTouCan (G15111VX) | |||
3 | A, B | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
4 | water | water | 18.0 | 939 | Chemie (HOH) |
Sequence modifications
A, B: 41 - 663 (UniProt: B3TLD6)
PDB | External Database | Details |
---|---|---|
Met 20 | - | initiating methionine |
Gly 21 | - | expression tag |
Ser 22 | - | expression tag |
Ser 23 | - | expression tag |
His 24 | - | expression tag |
His 25 | - | expression tag |
His 26 | - | expression tag |
His 27 | - | expression tag |
His 28 | - | expression tag |
His 29 | - | expression tag |
Ser 30 | - | expression tag |
Ser 31 | - | expression tag |
Gly 32 | - | expression tag |
Leu 33 | - | expression tag |
Val 34 | - | expression tag |
Pro 35 | - | expression tag |
Arg 36 | - | expression tag |
Gly 37 | - | expression tag |
Ser 38 | - | expression tag |
His 39 | - | expression tag |
Met 40 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 143784.5 | |
Branched | Number of molecules | 2 |
Total formula weight | 792.7 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 480.3 | |
All* | Total formula weight | 145057.5 |