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5BWL

Crystal Structure of SIRT5 in Complex with a Coumarin-Labelled Succinyl Peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NAD-dependent protein deacylase sirtuin-5, mitochondrialpolymer29031584.91UniProt (Q9NXA8)
Pfam (PF02146)
Homo sapiens (Human)Regulatory protein SIR2 homolog 5,SIR2-like protein 5
2B
(B)
Coumarin-labelled succinyl peptidepolymer3416.51synthetic construct
3C
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
4D
(B)
7-AMINO-4-METHYL-CHROMEN-2-ONEnon-polymer175.21Chemie (MCM)
5E, F
(A, B)
waterwater18.0376Chemie (HOH)
Sequence modifications
A: 33 - 302 (UniProt: Q9NXA8)
PDBExternal DatabaseDetails
Met 13-expression tag
Gly 14-expression tag
Ser 15-expression tag
Ser 16-expression tag
His 17-expression tag
His 18-expression tag
His 19-expression tag
His 20-expression tag
His 21-expression tag
His 22-expression tag
Ser 23-expression tag
Ser 24-expression tag
Gly 25-expression tag
Leu 26-expression tag
Val 27-expression tag
Pro 28-expression tag
Arg 29-expression tag
Gly 30-expression tag
Ser 31-expression tag
His 32-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight32001.4
Non-Polymers*Number of molecules2
Total formula weight240.6
All*Total formula weight32242.0
*Water molecules are not included.

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PDB entries from 2025-12-31

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