5BJY
x-ray structure of the PglF 4,5-dehydratase from campylobacter jejuni, variant M405Y, in complex with UDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | WlaL protein | polymer | 366 | 40881.4 | 2 | UniProt (O86159) Pfam (PF02719) | Campylobacter jejuni | |
| 2 | C, K (A, B) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 2 | Chemie (UDP) | |||
| 3 | D, L (A, B) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 2 | Chemie (NAD) | |||
| 4 | E, F, G, M, N (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 5 | H, I, J, O, P... (A, B) | SODIUM ION | non-polymer | 23.0 | 6 | Chemie (NA) | |||
| 6 | R, S (A, B) | water | water | 18.0 | 726 | Chemie (HOH) |
Sequence modifications
A, B: 244 - 590 (UniProt: O86159)
| PDB | External Database | Details |
|---|---|---|
| Tyr 405 | Met 405 | engineered mutation |
| Ala 591 | - | expression tag |
| Ala 592 | - | expression tag |
| Gly 593 | - | expression tag |
| Phe 594 | - | expression tag |
| Asn 595 | - | expression tag |
| Arg 596 | - | expression tag |
| Ile 597 | - | expression tag |
| Pro 598 | - | expression tag |
| Ala 599 | - | expression tag |
| Ala 600 | - | expression tag |
| Ala 601 | - | expression tag |
| Leu 602 | - | expression tag |
| Glu 603 | - | expression tag |
| His 604 | - | expression tag |
| His 605 | - | expression tag |
| His 606 | - | expression tag |
| His 607 | - | expression tag |
| His 608 | - | expression tag |
| His 609 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 81762.8 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 2583.5 | |
| All* | Total formula weight | 84346.3 |






