5B2N
Crystal structure of the light-driven chloride ion-pumping rhodopsin, ClP, from Nonlabens marinus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Chloride pumping rhodopsin | polymer | 279 | 30710.9 | 1 | UniProt (W8VZW3) Pfam (PF01036) | Nonlabens marinus S1-08 | |
| 2 | B (A) | RETINAL | non-polymer | 284.4 | 1 | Chemie (RET) | |||
| 3 | C (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 4 | D, E (A) | HEXANE | non-polymer | 86.2 | 2 | Chemie (HEX) | |||
| 5 | F, G, H, I (A) | N-OCTANE | non-polymer | 114.2 | 4 | Chemie (OCT) | |||
| 6 | J, K, L (A) | DODECANE | non-polymer | 170.3 | 3 | Chemie (D12) | |||
| 7 | M, N, O (A) | DECANE | non-polymer | 142.3 | 3 | Chemie (D10) | |||
| 8 | P (A) | water | water | 18.0 | 96 | Chemie (HOH) |
Sequence modifications
A: 1 - 272 (UniProt: W8VZW3)
| PDB | External Database | Details |
|---|---|---|
| Gly -6 | - | expression tag |
| Ser -5 | - | expression tag |
| Ser -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 30710.9 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1887.0 | |
| All* | Total formula weight | 32597.9 |
