5AV9
human nucleosome core particle
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E (A, E) | Histone H3.1 | polymer | 139 | 15719.4 | 2 | UniProt (P68431) Pfam (PF00125) | Homo sapiens (Human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
2 | B, F (B, F) | Histone H4 | polymer | 104 | 11451.5 | 2 | UniProt (P62805) Pfam (PF15511) | Homo sapiens (Human) | |
3 | C, G (C, G) | Histone H2A type 1-B/E | polymer | 133 | 14447.8 | 2 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) | Homo sapiens (Human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
4 | D, H (D, H) | Histone H2B type 1-J | polymer | 129 | 14217.5 | 2 | UniProt (P06899) Pfam (PF00125) | Homo sapiens (Human) | Histone H2B.1,Histone H2B.r,H2B/r |
5 | I (I) | DNA (147-MER) | polymer | 147 | 45368.1 | 1 | Homo sapiens | ||
6 | J (J) | DNA (147-MER) | polymer | 147 | 45359.0 | 1 | Homo sapiens | ||
7 | K, L, M, N, O... (E, I, J) | MANGANESE (II) ION | non-polymer | 54.9 | 14 | Chemie (MN) | |||
8 | AA, BA, CA, DA, EA... (C, D, E, F, G...) | water | water | 18.0 | 495 | Chemie (HOH) |
Sequence modifications
A, E: 0 - 135 (UniProt: P68431)
B, F: 0 - 102 (UniProt: P62805)
C, G: 0 - 129 (UniProt: P04908)
D, H: 0 - 125 (UniProt: P06899)
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 202399.6 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 769.1 | |
All* | Total formula weight | 203168.7 |