5AOG
Structure of Sorghum peroxidase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | CATIONIC PEROXIDASE SPC4 | polymer | 307 | 33099.5 | 1 | UniProt (P84516) Pfam (PF00141) | SORGHUM BICOLOR (SORGHUM) | HEME PEROXIDASE |
| 2 | B (B) | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G11971MR) | |||
| 3 | C (C) | beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1026.9 | 1 | In PDB GlyTouCan (G68461PT) | |||
| 4 | D (A) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 1 | Chemie (HEM) | |||
| 5 | E (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 6 | F (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 7 | G (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 8 | H (A) | 1H-INDOL-3-YLACETIC ACID | non-polymer | 175.2 | 1 | Chemie (IAC) | |||
| 9 | I (A) | water | water | 18.0 | 284 | Chemie (HOH) |
Sequence modifications
A: 34 - 340 (UniProt: P84516)
| PDB | External Database | Details |
|---|---|---|
| Arg 159 | Lys 159 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 33099.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1597.5 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 946.8 | |
| All* | Total formula weight | 35643.8 |
