5AKN
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE non-CODING STRAND B AND IN THE PRESENCE OF 2MM MN
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, F, K | HOMING ENDONUCLEASE I-DMOI | polymer | 199 | 23210.0 | 3 | UniProt (P21505) Pfam (PF14528) In PDB | DESULFUROCOCCUS MOBILIS | |
2 | B, G | 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP)-3' | polymer | 14 | 4296.8 | 2 | SYNTHETIC CONSTRUCT | ||
3 | C | 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP)-3 | polymer | 11 | 3366.2 | 1 | SYNTHETIC CONSTRUCT | ||
4 | D | D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*CP)-3' | polymer | 15 | 4555.0 | 1 | SYNTHETIC CONSTRUCT | ||
5 | E, J, O | 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*CP)-3' | polymer | 10 | 3055.0 | 3 | SYNTHETIC CONSTRUCT | ||
6 | H, M | 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP*CP*GP*CP *GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*CP)-3' | polymer | 26 | 7966.1 | 2 | SYNTHETIC CONSTRUCT | ||
7 | L | 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP *CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*C)-3' | polymer | 29 | 8896.7 | 1 | SYNTHETIC CONSTRUCT | ||
8 | A, F, K | MANGANESE (II) ION | non-polymer | 54.9 | 6 | Chemie (MN) | |||
9 | water | water | 18.0 | 192 | Chemie (HOH) |
Sequence modifications
A, F, K: 2 - 188 (UniProt: P21505)
PDB | External Database | Details |
---|---|---|
Ala 1 | - | expression tag |
Ala 42 | Gln 42 | engineered mutation |
Met 120 | Lys 120 | engineered mutation |
Ala 189 | - | expression tag |
Ala 190 | - | expression tag |
Ala 191 | - | expression tag |
Leu 192 | - | expression tag |
Glu 193 | - | expression tag |
His 194 | - | expression tag |
His 195 | - | expression tag |
His 196 | - | expression tag |
His 197 | - | expression tag |
His 198 | - | expression tag |
His 199 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 13 |
Total formula weight | 120138.7 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 329.6 | |
All* | Total formula weight | 120468.4 |