5AFZ
Thrombin in complex with (2R)-2-(benzylsulfonylamino)-N-(2-((4- carbamimidoylphenyl)methylamino)-2-oxo-propyl)-3-phenyl-propanamide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | H | Prothrombin | polymer | 258 | 29651.1 | 1 | UniProt (P00734) Pfam (PF00089) In PDB | Homo sapiens (human) | Coagulation factor II |
| 2 | I | Hirudin-2 | polymer | 12 | 1548.6 | 1 | UniProt (P28504) UniProt (by SIFTS) (P09945) In PDB | Hirudo medicinalis | Hirudin II |
| 3 | L | Prothrombin | polymer | 29 | 3432.8 | 1 | UniProt (P00734) Pfam (PF09396) In PDB | Homo sapiens (human) | Coagulation factor II |
| 4 | H | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 5 | H | N-(BENZYLSULFONYL)-D-PHENYLALANYL-N-(4-CARBAMIMIDOYLBENZYL)GLYCINAMIDE | non-polymer | 507.6 | 1 | Chemie (UET) | |||
| 6 | H | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 7 | H | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 8 | water | water | 18.0 | 219 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 34632.5 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 869.8 | |
| All* | Total formula weight | 35502.3 |
