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5A7M

The structure of Hypocrea jecorina beta-xylosidase Xyl3A (Bxl1)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
BETA-XYLOSIDASEpolymer76684130.82UniProt (Q92458)
Pfam (PF00933)
Pfam (PF01915)
Pfam (PF14310)
TRICHODERMA REESEI (HYPOCREA JECORINA)
2C
(C)
alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1235.11In PDB
GlyTouCan (G07617FP)
3D, F, J, K
(D, F, J, K)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.44In PDB
GlyTouCan (G42666HT)
4E, I
(E, I)
alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.82In PDB
GlyTouCan (G42227JK)
5G
(G)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
6H
(H)
alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G81315DD)
7EA, FA, GA, L, M...
(B, A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.28Chemie (NAG)
8HA, IA, JA, KA, LA...
(B, A)
ZINC IONnon-polymer65.421Chemie (ZN)
9AA, BA, SA
(A, B)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.13Chemie (TRS)
10CA, TA, UA
(A, B)
GLYCEROLnon-polymer92.13Chemie (GOL)
11DA, VA
(A, B)
ACETATE IONnon-polymer59.02Chemie (ACT)
12WA, XA
(A, B)
waterwater18.01897Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight168261.6
BranchedNumber of molecules9
Total formula weight6089.6
Non-Polymers*Number of molecules37
Total formula weight3904.1
All*Total formula weight178255.3
*Water molecules are not included.

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PDB entries from 2025-12-10

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