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5A6M

Determining the specificities of the catalytic site from the very high resolution structure of the thermostable glucuronoxylan endo-Beta-1, 4-xylanase, CtXyn30A, from Clostridium thermocellum with a xylotetraose bound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
CARBOHYDRATE BINDING FAMILY 6polymer40946396.01UniProt (A3DJS9)
Pfam (PF17189)
RUMINICLOSTRIDIUM THERMOCELLUMXYN30A
2B
(B)
beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranosebranched414.41In PDB
GlyTouCan (G13162YT)
3C
(C)
beta-D-xylopyranose-(1-4)-beta-D-xylopyranosebranched282.21In PDB
BIRD (PRD_900116)
GlyTouCan (G87728WL)
4beta-beta-xylobiose
4D, E, F, G, H
(A)
PHOSPHATE IONnon-polymer95.05Chemie (PO4)
5I
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
6J
(A)
waterwater18.0553Chemie (HOH)
Sequence modifications
A: 1 - 386 (UniProt: A3DJS9)
PDBExternal DatabaseDetails
Met -22-expression tag
Gly -21-expression tag
Ser -20-expression tag
Ser -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
Ser -12-expression tag
Ser -11-expression tag
Gly -10-expression tag
Leu -9-expression tag
Val -8-expression tag
Pro -7-expression tag
Arg -6-expression tag
Gly -5-expression tag
Ser -4-expression tag
His -3-expression tag
Met -2-expression tag
Ala -1-expression tag
Ser 0-expression tag
Ser 77Phe 110engineered mutation
Ala 225Glu 258engineered mutation
Cys 315Tyr 348engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight46396.0
BranchedNumber of molecules2
Total formula weight696.6
Non-Polymers*Number of molecules6
Total formula weight581.0
All*Total formula weight47673.6
*Water molecules are not included.

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PDB entries from 2024-10-30

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