4ZYN
Crystal Structure of Parkin E3 ubiquitin ligase (linker deletion; delta 86-130)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | E3 ubiquitin-protein ligase parkin | polymer | 425 | 47333.9 | 2 | UniProt (Q9JK66) Pfam (PF00240) Pfam (PF17976) Pfam (PF17978) Pfam (PF22605) | Rattus norvegicus (Rat) | |
| 2 | C, D, E, F, G... (A, B) | ZINC ION | non-polymer | 65.4 | 16 | Chemie (ZN) | |||
| 3 | K, L, M, N, W... (A, B) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 4 | Y, Z (A, B) | water | water | 18.0 | 64 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 465 (UniProt: Q9JK66)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Leu -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| - | Asp 86 | deletion |
| - | Lys 87 | deletion |
| - | Pro 88 | deletion |
| - | Gln 89 | deletion |
| - | Ser 90 | deletion |
| - | Thr 91 | deletion |
| - | Pro 92 | deletion |
| - | Glu 93 | deletion |
| - | Gly 94 | deletion |
| - | Ser 95 | deletion |
| - | Ile 96 | deletion |
| - | Trp 97 | deletion |
| - | Glu 98 | deletion |
| - | Pro 99 | deletion |
| - | Arg 100 | deletion |
| - | Ser 101 | deletion |
| - | Leu 102 | deletion |
| - | Thr 103 | deletion |
| - | Arg 104 | deletion |
| - | Val 105 | deletion |
| - | Asp 106 | deletion |
| - | Leu 107 | deletion |
| - | Ser 108 | deletion |
| - | Ser 109 | deletion |
| - | His 110 | deletion |
| - | Ile 111 | deletion |
| - | Leu 112 | deletion |
| - | Pro 113 | deletion |
| - | Ala 114 | deletion |
| - | Asp 115 | deletion |
| - | Ser 116 | deletion |
| - | Val 117 | deletion |
| - | Gly 118 | deletion |
| - | Leu 119 | deletion |
| - | Ala 120 | deletion |
| - | Val 121 | deletion |
| - | Ile 122 | deletion |
| - | Leu 123 | deletion |
| - | Asp 124 | deletion |
| - | Thr 125 | deletion |
| - | Asp 126 | deletion |
| - | Ser 127 | deletion |
| - | Lys 128 | deletion |
| - | Ser 129 | deletion |
| - | Asp 130 | deletion |
| Ala 138 | Glu 138 | conflict |
| Arg 348 | Lys 348 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 94667.7 | |
| Non-Polymers* | Number of molecules | 22 |
| Total formula weight | 1622.9 | |
| All* | Total formula weight | 96290.6 |
