4ZIB
Crystal Structure of the C-terminal domain of PylRS mutant bound with 3-benzothienyl-l-alanine and ATP
エンティティ
Entity ID | 鎖名 | 説明 | 種類 | 鎖長 | 化学式量 | 分子数 | データベース名(アクセス番号) | 由来する生物種 | エンティティの一般名 |
1 | A | Pyrrolysine--tRNA ligase | polymer | 291 | 33384.2 | 1 | UniProt (Q8PWY1) Pfam (PF01409) In PDB | Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) | Pyrrolysine--tRNA(Pyl) ligase,Pyrrolysyl-tRNA synthetase,PylRS |
2 | A | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
3 | A | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 1 | Chemie (ATP) | |||
4 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 7 | Chemie (EDO) | |||
5 | A | 3-(1-benzothiophen-3-yl)-L-alanine | non-polymer | 221.3 | 1 | Chemie (4OG) | |||
6 | water | water | 18.0 | 139 | Chemie (HOH) |
配列変更
A: 185 - 454 (UniProt: Q8PWY1)
PDB | 外部データベース | 詳細 |
---|---|---|
Met 164 | - | initiating methionine |
Gly 165 | - | expression tag |
Ser 166 | - | expression tag |
Ser 167 | - | expression tag |
His 168 | - | expression tag |
His 169 | - | expression tag |
His 170 | - | expression tag |
His 171 | - | expression tag |
His 172 | - | expression tag |
His 173 | - | expression tag |
Ser 174 | - | expression tag |
Ser 175 | - | expression tag |
Gly 176 | - | expression tag |
Leu 177 | - | expression tag |
Val 178 | - | expression tag |
Pro 179 | - | expression tag |
Arg 180 | - | expression tag |
Gly 181 | - | expression tag |
Ser 182 | - | expression tag |
His 183 | - | expression tag |
Met 184 | - | expression tag |
Gly 346 | Asn 346 | engineered mutation |
Gln 348 | Cys 348 | engineered mutation |
配列ビューア
非対称単位の内容
タンパク質・ 核酸鎖 | 鎖の数 | 1 |
化学式量合計 | 33384.2 | |
タンパク質・ 核酸・ 糖鎖以外* | 分子数 | 12 |
化学式量合計 | 1235.8 | |
全て* | 化学式量合計 | 34620.0 |