4YY3
30S ribosomal subunit- HigB complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | 16S rRNA | polymer | 1522 | 493958.3 | 1 | GenBank (55771382) | Thermus thermophilus HB8 | |
2 | B | 30S ribosomal protein S2 | polymer | 256 | 29317.7 | 1 | UniProt (P80371) Pfam (PF00318) In PDB | Thermus thermophilus HB8 | |
3 | C | 30S ribosomal protein S3 | polymer | 239 | 26751.1 | 1 | UniProt (P80372) Pfam (PF07650) Pfam (PF00189) In PDB | Thermus thermophilus HB8 | |
4 | D | 30S ribosomal protein S4 | polymer | 209 | 24373.4 | 1 | UniProt (P80373) Pfam (PF00163) Pfam (PF01479) In PDB | Thermus thermophilus HB8 | |
5 | E | 30S ribosomal protein S5 | polymer | 162 | 17583.4 | 1 | UniProt (Q5SHQ5) Pfam (PF00333) Pfam (PF03719) In PDB | Thermus thermophilus HB8 | |
6 | F | 30S ribosomal protein S6 | polymer | 101 | 11988.8 | 1 | UniProt (Q5SLP8) Pfam (PF01250) In PDB | Thermus thermophilus HB8 | TS9 |
7 | G | 30S ribosomal protein S7 | polymer | 156 | 18051.0 | 1 | UniProt (P17291) Pfam (PF00177) In PDB | Thermus thermophilus HB8 | |
8 | H | 30S ribosomal protein S8 | polymer | 138 | 15868.6 | 1 | UniProt (Q5SHQ2) Pfam (PF00410) UniProt (by SIFTS) (P0DOY9) In PDB | Thermus thermophilus HB8 | |
9 | I | 30S ribosomal protein S9 | polymer | 128 | 14410.6 | 1 | UniProt (P80374) Pfam (PF00380) In PDB | Thermus thermophilus HB8 | |
10 | J | 30S ribosomal protein S10 | polymer | 105 | 11955.0 | 1 | UniProt (Q5SHN7) Pfam (PF00338) In PDB | Thermus thermophilus HB8 | |
11 | K | 30S ribosomal protein S11 | polymer | 129 | 13737.9 | 1 | UniProt (P80376) Pfam (PF00411) In PDB | Thermus thermophilus HB8 | |
12 | L | 30S ribosomal protein S12 | polymer | 132 | 14637.4 | 1 | UniProt (Q5SHN3) Pfam (PF00164) In PDB | Thermus thermophilus HB8 | |
13 | M | 30S ribosomal protein S13 | polymer | 126 | 14338.9 | 1 | UniProt (P80377) Pfam (PF00416) In PDB | Thermus thermophilus HB8 | |
14 | N | 30S ribosomal protein S14 type Z | polymer | 61 | 7158.7 | 1 | UniProt (Q5SHQ1) Pfam (PF00253) UniProt (by SIFTS) (P0DOY6) In PDB | Thermus thermophilus HB8 | |
15 | O | 30S ribosomal protein S15 | polymer | 89 | 10578.4 | 1 | UniProt (Q5SJ76) Pfam (PF00312) In PDB | Thermus thermophilus HB8 | |
16 | P | 30S ribosomal protein S16 | polymer | 88 | 10410.0 | 1 | UniProt (Q5SJH3) Pfam (PF00886) In PDB | Thermus thermophilus HB8 | |
17 | Q | 30S ribosomal protein S17 | polymer | 105 | 12325.7 | 1 | UniProt (Q5SHP7) Pfam (PF00366) UniProt (by SIFTS) (P0DOY7) In PDB | Thermus thermophilus HB8 | |
18 | R | 30S ribosomal protein S18 | polymer | 88 | 10258.3 | 1 | UniProt (Q5SLQ0) Pfam (PF01084) In PDB | Thermus thermophilus HB8 | |
19 | S | 30S ribosomal protein S19 | polymer | 93 | 10605.5 | 1 | UniProt (Q5SHP2) Pfam (PF00203) In PDB | Thermus thermophilus HB8 | |
20 | T | 30S ribosomal protein S20 | polymer | 106 | 11736.1 | 1 | UniProt (P80380) Pfam (PF01649) In PDB | Thermus thermophilus HB8 | |
21 | V | 30S ribosomal protein Thx | polymer | 27 | 3350.0 | 1 | UniProt (Q5SIH3) Pfam (PF17070) In PDB | Thermus thermophilus HB8 | S31 |
22 | Y | Killer protein | polymer | 118 | 13713.4 | 1 | UniProt (Q7A225) Pfam (PF05015) In PDB | Proteus vulgaris | |
23 | A, B, D, E | MAGNESIUM ION | non-polymer | 24.3 | 194 | Chemie (MG) | |||
24 | D, N | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence modifications
Y: 2 - 92 (UniProt: Q7A225)
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Gly 1 | - | expression tag |
Lys 93 | - | expression tag |
Leu 94 | - | expression tag |
Gly 95 | - | expression tag |
Pro 96 | - | expression tag |
Glu 97 | - | expression tag |
Gln 98 | - | expression tag |
Lys 99 | - | expression tag |
Leu 100 | - | expression tag |
Ile 101 | - | expression tag |
Ser 102 | - | expression tag |
Glu 103 | - | expression tag |
Glu 104 | - | expression tag |
Asp 105 | - | expression tag |
Leu 106 | - | expression tag |
Asn 107 | - | expression tag |
Ser 108 | - | expression tag |
Ala 109 | - | expression tag |
Val 110 | - | expression tag |
Asp 111 | - | expression tag |
His 112 | - | expression tag |
His 113 | - | expression tag |
His 114 | - | expression tag |
His 115 | - | expression tag |
His 116 | - | expression tag |
His 117 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 22 |
Total formula weight | 797108.0 | |
Non-Polymers* | Number of molecules | 196 |
Total formula weight | 4846.0 | |
All* | Total formula weight | 801954.0 |