4YOZ
p107 pocket domain in complex with HPV E7 peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Retinoblastoma-like protein 1,Retinoblastoma-like protein 1 | polymer | 371 | 43266.0 | 1 | UniProt (P28749) Pfam (PF01858) Pfam (PF01857) In PDB | Homo sapiens (Human) | 107 kDa retinoblastoma-associated protein,p107,pRb1,107 kDa retinoblastoma-associated protein,p107,pRb1 |
| 2 | B | HPV E7 peptide | polymer | 9 | 1160.3 | 1 | UniProt (by SIFTS) (P03129) In PDB | Human papillomavirus | |
| 3 | A | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 4 | water | water | 18.0 | 111 | Chemie (HOH) |
Sequence modifications
A: 391 - 593 (UniProt: P28749)
A: 777 - 972 (UniProt: P28749)
| PDB | External Database | Details |
|---|---|---|
| Gly 388 | - | expression tag |
| Glu 389 | - | expression tag |
| Phe 390 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Pro 594 | - | linker |
| Asn 773 | - | linker |
| Asn 774 | - | linker |
| Phe 775 | - | linker |
| Glu 776 | - | linker |
| Asn 779 | Ile 779 | conflict |
| - | Pro 888 | deletion |
| - | Arg 889 | deletion |
| - | Glu 890 | deletion |
| - | Val 891 | deletion |
| - | Val 892 | deletion |
| - | Ala 893 | deletion |
| - | Tyr 894 | deletion |
| - | Asn 895 | deletion |
| - | Lys 896 | deletion |
| - | Asn 897 | deletion |
| - | Ile 898 | deletion |
| - | Asn 899 | deletion |
| - | Asp 900 | deletion |
| - | Asp 901 | deletion |
| - | Phe 902 | deletion |
| - | Glu 903 | deletion |
| - | Met 904 | deletion |
| - | Ile 905 | deletion |
| - | Asp 906 | deletion |
| - | Cys 907 | deletion |
| - | Asp 908 | deletion |
| - | Leu 909 | deletion |
| - | Glu 910 | deletion |
| - | Asp 911 | deletion |
| - | Ala 912 | deletion |
| - | Thr 913 | deletion |
| - | Lys 914 | deletion |
| - | Thr 915 | deletion |
| - | Pro 916 | deletion |
| - | Asp 917 | deletion |
| - | Cys 918 | deletion |
| - | Ser 919 | deletion |
| - | Ser 920 | deletion |
| - | Gly 921 | deletion |
| - | Pro 922 | deletion |
| - | Val 923 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 44426.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 384.3 | |
| All* | Total formula weight | 44810.5 |
