4YGB
Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-free form
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | Protein ERGIC-53 | polymer | 246 | 27154.2 | 2 | UniProt (P49257) Pfam (PF03388) In PDB | Homo sapiens (Human) | ER-Golgi intermediate compartment 53 kDa protein,Gp58,Intracellular mannose-specific lectin MR60,Lectin mannose-binding 1 |
2 | B, D | Multiple coagulation factor deficiency protein 2 | polymer | 104 | 12056.2 | 2 | UniProt (Q8NI22) Pfam (PF13499) In PDB | Homo sapiens (Human) | Neural stem cell-derived neuronal survival protein |
3 | A, C | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
4 | B, D | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
5 | water | water | 18.0 | 239 | Chemie (HOH) |
Sequence modifications
A, C: 31 - 269 (UniProt: P49257)
B, D: 67 - 146 (UniProt: Q8NI22)
PDB | External Database | Details |
---|---|---|
Met 24 | - | expression tag |
Asn 25 | - | expression tag |
His 26 | - | expression tag |
Lys 27 | - | expression tag |
Val 28 | - | expression tag |
His 29 | - | expression tag |
Met 30 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 43 | - | expression tag |
Gly 44 | - | expression tag |
His 45 | - | expression tag |
His 46 | - | expression tag |
His 47 | - | expression tag |
His 48 | - | expression tag |
His 49 | - | expression tag |
His 50 | - | expression tag |
His 51 | - | expression tag |
His 52 | - | expression tag |
His 53 | - | expression tag |
His 54 | - | expression tag |
Ser 55 | - | expression tag |
Ser 56 | - | expression tag |
Gly 57 | - | expression tag |
His 58 | - | expression tag |
Ile 59 | - | expression tag |
Glu 60 | - | expression tag |
Gly 61 | - | expression tag |
Arg 62 | - | expression tag |
His 63 | - | expression tag |
Met 64 | - | expression tag |
Leu 65 | - | expression tag |
Glu 66 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 78420.8 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 344.5 | |
All* | Total formula weight | 78765.3 |