4XTM
Crystal structure of a recombinant Vatairea macrocarpa seed lectin complexed with GalNAc
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Seed lectin | polymer | 250 | 27495.4 | 1 | UniProt (P81371) Pfam (PF00139) In PDB | Vatairea macrocarpa | VML |
| 2 | A | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 3 | A | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 4 | A | 2-acetamido-2-deoxy-alpha-D-galactopyranose | non-polymer | 221.2 | 1 | Chemie (A2G) | |||
| 5 | A | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) | |||
| 6 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 7 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 8 | water | water | 18.0 | 32 | Chemie (HOH) |
Sequence modifications
A: 1 - 240 (UniProt: P81371)
| PDB | External Database | Details |
|---|---|---|
| Met -1 | - | initiating methionine |
| Ala 0 | - | expression tag |
| Leu 241 | - | expression tag |
| Glu 242 | - | expression tag |
| His 243 | - | expression tag |
| His 244 | - | expression tag |
| His 245 | - | expression tag |
| His 246 | - | expression tag |
| His 247 | - | expression tag |
| His 248 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 27495.4 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 696.5 | |
| All* | Total formula weight | 28191.9 |
