4XL8
Crystal Structure of Human Adenovirus 52 Short Fiber Knob in Complex with 2-O-Methyl-5-N-Acetylneuraminic Acid
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Fiber-1 | polymer | 209 | 22420.9 | 3 | UniProt (A0MK70) Pfam (PF00541) In PDB | Human adenovirus 52 | Adenovirus 52 short fiber knob |
2 | A, C | 2-O-methyl-5-N-acetyl-alpha-D-neuraminic acid | non-polymer | 323.3 | 2 | Chemie (MNA) | |||
3 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
4 | B | TRIS(HYDROXYETHYL)AMINOMETHANE | non-polymer | 163.2 | 1 | Chemie (TAM) | |||
5 | B | GLUTAMIC ACID | non-polymer | 147.1 | 1 | Chemie (GLU) | |||
6 | B | ALANINE | non-polymer | 89.1 | 1 | Chemie (ALA) | |||
7 | C | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
8 | C | (4R)-2-METHYLPENTANE-2,4-DIOL | non-polymer | 118.2 | 1 | Chemie (MRD) | |||
9 | water | water | 18.0 | 351 | Chemie (HOH) |
Sequence modifications
A, B, C: 183 - 363 (UniProt: A0MK70)
PDB | External Database | Details |
---|---|---|
Met 155 | - | initiating methionine |
Arg 156 | - | expression tag |
Gly 157 | - | expression tag |
Ser 158 | - | expression tag |
His 159 | - | expression tag |
His 160 | - | expression tag |
His 161 | - | expression tag |
His 162 | - | expression tag |
His 163 | - | expression tag |
His 164 | - | expression tag |
Gly 165 | - | expression tag |
Ser 166 | - | expression tag |
Gly 167 | - | expression tag |
Ser 168 | - | expression tag |
Gly 169 | - | expression tag |
Ser 170 | - | expression tag |
Gly 171 | - | expression tag |
Ile 172 | - | expression tag |
Glu 173 | - | expression tag |
Gly 174 | - | expression tag |
Arg 175 | - | expression tag |
Pro 176 | - | expression tag |
Tyr 177 | - | expression tag |
Asn 178 | - | expression tag |
Gly 179 | - | expression tag |
Thr 180 | - | expression tag |
Gly 181 | - | expression tag |
Ser 182 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 67262.6 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1374.5 | |
All* | Total formula weight | 68637.1 |