4X6D
CD1a ternary complex with endogenous lipids and BK6 TCR
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | T-cell surface glycoprotein CD1a | polymer | 275 | 31567.4 | 2 | UniProt (P06126) Pfam (PF16497) Pfam (PF07654) | Homo sapiens (Human) | T-cell surface antigen T6/Leu-6,hTa1 thymocyte antigen |
| 2 | B, D (B, D) | Beta-2-microglobulin | polymer | 99 | 11748.2 | 2 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (Human) | |
| 3 | E, G (E, G) | TCR alpha | polymer | 207 | 22998.3 | 2 | Pfam (PF09291) UniProt (by SIFTS) (P01848) | Homo sapiens | |
| 4 | F, H (F, H) | TCR beta | polymer | 245 | 27598.0 | 2 | Pfam (PF07654) UniProt (by SIFTS) (P01850) | Homo sapiens | |
| 5 | I, J (I, J) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G21290RB) | |||
| 6 | K (A) | OLEIC ACID | non-polymer | 282.5 | 1 | Chemie (OLA) | |||
| 7 | L (C) | PALMITOLEIC ACID | non-polymer | 254.4 | 1 | Chemie (PAM) | |||
| 8 | M (H) | water | water | 18.0 | 1 | Chemie (HOH) |
Sequence modifications
A, C: 4 - 278 (UniProt: P06126)
| PDB | External Database | Details |
|---|---|---|
| Ile 13 | Thr 30 | variant |
| Trp 51 | Cys 68 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 187823.8 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1141.1 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 536.9 | |
| All* | Total formula weight | 189501.7 |
