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4X16

JC Mad-1 polyomavirus VP1 in complex with GD1a oligosaccharide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, EMajor capsid protein VP1polymer27230075.95UniProt (P03089)
Pfam (PF00718)
In PDB
JC polyomavirus (JCPyV)Major structural protein VP1
2A, B, C, D, EGLYCEROLnon-polymer92.19Chemie (GOL)
3A, B, C, D, E1,2-ETHANEDIOLnon-polymer62.16Chemie (EDO)
4A, BPOTASSIUM IONnon-polymer39.13Chemie (K)
5B, C, DN-acetyl-alpha-neuraminic acidnon-polymer309.33Chemie (SIA)
6waterwater18.01070Chemie (HOH)
Sequence modifications
A, B, C, D, E: 22 - 289 (UniProt: P03089)
PDBExternal DatabaseDetails
Gly 18-expression tag
Ser 19-expression tag
His 20-expression tag
Met 21-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight150379.3
Non-Polymers*Number of molecules21
Total formula weight2246.4
All*Total formula weight152625.7
*Water molecules are not included.

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PDB entries from 2024-07-10

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