4X11
JC Polyomavirus genotype 3 VP1 in complex with GD1a oligosaccharide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (B, E, A, C, D) | Major capsid protein | polymer | 272 | 30033.8 | 5 | UniProt (P90498) Pfam (PF00718) | JC polyomavirus type 3 (JCPyV) | VP1,VP1 capsid protein |
| 2 | F, K, R (B, E, A) | N-acetyl-alpha-neuraminic acid | non-polymer | 309.3 | 3 | Chemie (SIA) | |||
| 3 | AA, BA, G, H, L... (C, B, E, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 14 | Chemie (EDO) | |||
| 4 | EA, I, O, S (D, B, E, A) | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
| 5 | CA, DA, FA, J, Q... (C, D, B, E, A) | POTASSIUM ION | non-polymer | 39.1 | 6 | Chemie (K) | |||
| 6 | GA, HA, IA, JA, KA (B, E, A, C, D) | water | water | 18.0 | 809 | Chemie (HOH) |
Sequence modifications
B, E, A, C, D: 22 - 289 (UniProt: P90498)
| PDB | External Database | Details |
|---|---|---|
| Gly 18 | - | expression tag |
| Ser 19 | - | expression tag |
| His 20 | - | expression tag |
| Met 21 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 150169.0 | |
| Non-Polymers* | Number of molecules | 27 |
| Total formula weight | 2399.7 | |
| All* | Total formula weight | 152568.7 |
