4WU1

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (13)	16S ribosomal RNA	polymer	1522	493958.3	1	GenBank (155076)	Thermus thermophilus HB8	16S ribosomal RNA
2	B, DB (1E, 12)	30S ribosomal protein S2	polymer	256	29317.7	2	UniProt (P62662) Pfam (PF00318) UniProt (by SIFTS) (P80371)	Thermus thermophilus HB8
3	C, EB (2E, 22)	30S ribosomal protein S3	polymer	239	26751.1	2	UniProt (P62663) Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (P80372)	Thermus thermophilus HB8
4	D, FB (3E, 32)	30S ribosomal protein S4	polymer	209	24373.4	2	UniProt (P62664) Pfam (PF00163) Pfam (PF01479) UniProt (by SIFTS) (P80373)	Thermus thermophilus HB8
5	E, GB (4E, 42)	30S ribosomal protein S5	polymer	162	17583.4	2	UniProt (P27152) Pfam (PF00333) Pfam (PF03719) UniProt (by SIFTS) (Q5SHQ5)	Thermus thermophilus HB8
6	F, HB (5E, 52)	30S ribosomal protein S6	polymer	101	11988.8	2	UniProt (P23370) Pfam (PF01250) UniProt (by SIFTS) (Q5SLP8)	Thermus thermophilus HB8	TS9
7	G, IB (6E, 62)	30S ribosomal protein S7	polymer	156	18051.0	2	UniProt (P62667) Pfam (PF00177) UniProt (by SIFTS) (P17291)	Thermus thermophilus HB8
8	H, JB (7E, 72)	30S ribosomal protein S8	polymer	138	15868.6	2	UniProt (P24319) Pfam (PF00410) UniProt (by SIFTS) (P0DOY9)	Thermus thermophilus HB8
9	I, KB (8E, 82)	30S ribosomal protein S9	polymer	128	14410.6	2	UniProt (P80374) Pfam (PF00380)	Thermus thermophilus HB8
10	J, LB (1I, 1A)	30S ribosomal protein S10	polymer	105	11955.0	2	UniProt (P80375) Pfam (PF00338) UniProt (by SIFTS) (Q5SHN7)	Thermus thermophilus HB8
11	K, MB (2I, 2A)	30S ribosomal protein S11	polymer	129	13737.9	2	UniProt (P62654) Pfam (PF00411) UniProt (by SIFTS) (P80376)	Thermus thermophilus HB8
12	L, NB (3I, 3A)	30S ribosomal protein S12	polymer	132	14637.4	2	UniProt (P17293) Pfam (PF00164) UniProt (by SIFTS) (Q5SHN3)	Thermus thermophilus HB8
13	M, OB (4I, 4A)	30S ribosomal protein S13	polymer	126	14338.9	2	UniProt (P62655) Pfam (PF00416) UniProt (by SIFTS) (P80377)	Thermus thermophilus HB8
14	N, PB (5I, 5A)	30S ribosomal protein S14 type Z	polymer	61	7158.7	2	UniProt (P24320) Pfam (PF00253) UniProt (by SIFTS) (P0DOY6)	Thermus thermophilus HB8
15	O, QB (6I, 6A)	30S ribosomal protein S15	polymer	89	10578.4	2	UniProt (P80378) Pfam (PF00312) UniProt (by SIFTS) (Q5SJ76)	Thermus thermophilus HB8
16	P, RB (7I, 7A)	30S ribosomal protein S16	polymer	88	10410.0	2	UniProt (P62238) Pfam (PF00886) UniProt (by SIFTS) (Q5SJH3)	Thermus thermophilus HB8
17	Q, SB (8I, 8A)	30S ribosomal protein S17	polymer	105	12325.7	2	UniProt (Q5SHP7)	Thermus thermophilus HB8
18	R, TB (9I, 9A)	30S ribosomal protein S18	polymer	88	10258.3	2	UniProt (P62659) Pfam (PF01084) UniProt (by SIFTS) (Q5SLQ0)	Thermus thermophilus HB8
19	S, UB (AI, AA)	30S ribosomal protein S19	polymer	93	10605.5	2	UniProt (P80381) Pfam (PF00203) UniProt (by SIFTS) (Q5SHP2)	Thermus thermophilus HB8
20	T, VB (BI, BA)	30S ribosomal protein S20	polymer	106	11736.1	2	UniProt (P80380) Pfam (PF01649)	Thermus thermophilus HB8
21	U, WB (1F, 1B)	30S ribosomal protein Thx	polymer	27	3350.0	2	UniProt (P62612) Pfam (PF17070) UniProt (by SIFTS) (Q5SIH3)	Thermus thermophilus HB8
22	V, W, XB, YB (2K, 3K, 2L, 3L)	tRNA-Tyr	polymer	85	27574.7	4	GenBank (595583568)	Escherichia coli
23	X, ZB (4K, 4L)	mRNA	polymer	27	8861.5	2		Thermus thermophilus HB8
24	AC, Y (1H, 14)	23S ribosomal RNA	polymer	2917	948539.9	2	GenBank (48268)	Thermus thermophilus HB8
25	BC, Z (16, 1J)	5S ribosomal RNA	polymer	122	39540.6	2	GenBank (37223181)	Thermus thermophilus HB8
26	AA, CC (71, 79)	50S ribosomal protein L1	polymer	229	24867.7	2	UniProt (P27150) Pfam (PF00687)	Thermus thermophilus HB8
27	BA, DC (11, 19)	50S ribosomal protein L2	polymer	276	30532.6	2	UniProt (Q72I07) Pfam (PF00181) Pfam (PF03947) UniProt (by SIFTS) (P60405)	Thermus thermophilus HB8
28	CA, EC (21, 29)	50S ribosomal protein L3	polymer	206	22450.2	2	UniProt (P52860) Pfam (PF00297) UniProt (by SIFTS) (Q5SHN8)	Thermus thermophilus HB8
29	DA, FC (31, 39)	50S ribosomal protein L4	polymer	210	23271.9	2	UniProt (Q5SHN9) Pfam (PF00573)	Thermus thermophilus HB8	L1e
30	EA, GC (41, 49)	50S ribosomal protein L5	polymer	182	21061.6	2	UniProt (P41201) Pfam (PF00281) Pfam (PF00673) UniProt (by SIFTS) (Q5SHQ0)	Thermus thermophilus HB8	TL4,TthL5
31	FA, HC (51, 59)	50S ribosomal protein L6	polymer	180	19568.9	2	UniProt (P24316) Pfam (PF00347) UniProt (by SIFTS) (P0DOY8)	Thermus thermophilus HB8
32	GA, IC (61, 69)	50S ribosomal protein L9	polymer	148	16422.2	2	UniProt (Q5SLQ1) Pfam (PF01281) Pfam (PF03948)	Thermus thermophilus HB8
33	HA, JC (58, 15)	50S ribosomal protein L13	polymer	140	15927.9	2	UniProt (Q72IN1) Pfam (PF00572) UniProt (by SIFTS) (P60488)	Thermus thermophilus HB8
34	IA, KC (68, 25)	50S ribosomal protein L14	polymer	122	13323.6	2	UniProt (Q5SHP8) Pfam (PF00238)	Thermus thermophilus HB8
35	JA, LC (78, 35)	50S ribosomal protein L15	polymer	150	16319.1	2	UniProt (P74910) Pfam (PF00828) UniProt (by SIFTS) (Q5SHQ7)	Thermus thermophilus HB8
36	KA, MC (88, 45)	50S ribosomal protein L16	polymer	141	15993.9	2	UniProt (P60489) Pfam (PF00252)	Thermus thermophilus HB8
37	LA, NC (98, 55)	50S ribosomal protein L17	polymer	118	13750.1	2	UniProt (Q72I33) Pfam (PF01196) UniProt (by SIFTS) (Q9Z9H5)	Thermus thermophilus HB8
38	MA, OC (A8, 65)	50S ribosomal protein L18	polymer	112	12639.8	2	UniProt (P80320) Pfam (PF00861) UniProt (by SIFTS) (Q5SHQ4)	Thermus thermophilus HB8	TL24
39	NA, PC (B8, 75)	50S ribosomal protein L19	polymer	146	17188.8	2	UniProt (P60490) Pfam (PF01245)	Thermus thermophilus HB8
40	OA, QC (C8, 85)	50S ribosomal protein L20	polymer	118	13779.3	2	UniProt (Q72L76) Pfam (PF00453) UniProt (by SIFTS) (P60491)	Thermus thermophilus HB8
41	PA, RC (D8, 95)	50S ribosomal protein L21	polymer	101	11069.2	2	UniProt (Q72HR2) Pfam (PF00829) UniProt (by SIFTS) (P60492)	Thermus thermophilus HB8
42	QA, SC (E8, A5)	50S ribosomal protein L22	polymer	113	12808.1	2	UniProt (P48286) Pfam (PF00237) UniProt (by SIFTS) (Q5SHP3)	Thermus thermophilus HB8
43	RA, TC (F8, B5)	50S ribosomal protein L23	polymer	96	10759.8	2	UniProt (Q9RA57) Pfam (PF00276) UniProt (by SIFTS) (Q5SHP0)	Thermus thermophilus HB8	L*23
44	SA, UC (G8, C5)	50S ribosomal protein L24	polymer	110	12085.6	2	UniProt (Q56435) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (Q5SHP9)	Thermus thermophilus HB8
45	TA, VC (H8, D5)	50S ribosomal protein L25	polymer	206	23238.6	2	UniProt (Q72IA7) Pfam (PF01386) Pfam (PF14693) UniProt (by SIFTS) (Q5SHZ1)	Thermus thermophilus HB8	General stress protein CTC
46	UA, WC (I8, E5)	50S ribosomal protein L27	polymer	85	9529.1	2	UniProt (P60493) Pfam (PF01016)	Thermus thermophilus HB8
47	VA, XC (J8, F5)	50S ribosomal protein L28	polymer	98	11004.2	2	UniProt (P60494) Pfam (PF00830)	Thermus thermophilus HB8
48	WA, YC (K8, G5)	50S ribosomal protein L29	polymer	72	8670.3	2	UniProt (Q72I12) Pfam (PF00831) UniProt (by SIFTS) (Q5SHP6)	Thermus thermophilus HB8
49	XA, ZC (L8, H5)	50S ribosomal protein L30	polymer	60	6799.1	2	UniProt (Q72I22) Pfam (PF00327) UniProt (by SIFTS) (Q5SHQ6)	Thermus thermophilus HB8
50	AD, YA (M8, I5)	50S ribosomal protein L31	polymer	71	8300.5	2	UniProt (Q72JR0) Pfam (PF01197) UniProt (by SIFTS) (Q5SJE1)	Thermus thermophilus HB8
51	BD, ZA (N8, J5)	50S ribosomal protein L32	polymer	60	6722.1	2	UniProt (P80339) Pfam (PF01783)	Thermus thermophilus HB8
52	AB, CD (P8, L5)	50S ribosomal protein L34	polymer	49	6132.4	2	UniProt (P80340) Pfam (PF00468)	Thermus thermophilus HB8
53	BB, DD (Q8, M5)	50S ribosomal protein L35	polymer	65	7506.2	2	UniProt (P80341) Pfam (PF01632) UniProt (by SIFTS) (Q5SKU1)	Thermus thermophilus HB8
54	CB (1G)	16S ribosomal RNA	polymer	1522	493997.3	1	GenBank (155076)	Thermus thermophilus HB8	16S ribosomal RNA
55	AAA, AAB, ABA, ABB, ACA... (1H, 14, 13, 11, 49...)	MAGNESIUM ION	non-polymer		24.3	1381	Chemie (MG)
56	DI, FKA, HEA, HI, HKA... (3E, 32, G8, 5I, 5A...)	ZINC ION	non-polymer		65.4	6	Chemie (ZN)
57	AFB, AGB, AHB, AIB, AJB... (13, 1H, 1G, 14, 1J...)	water	water		18.0	2269	Chemie (HOH)

Sequence modifications

1H, 14: 1 - 2907 (GenBank: 48268)

PDB	External Database	Details
U 161	-	insertion
G 493	-	insertion
G 1228	-	insertion

Contents of the asymmetric unit

Polymers	Number of chains	108
	Total formula weight	4494456.7
Non-Polymers*	Number of molecules	1387
	Total formula weight	33957.7
All*	Total formula weight	4528414.4

*Water molecules are not included.