4WO4
The molecular bases of Delta/Alpha beta T cell-mediated antigen recognition.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | Antigen-presenting glycoprotein CD1d | polymer | 274 | 31184.2 | 1 | UniProt (P15813) Pfam (PF16497) Pfam (PF07654) | Homo sapiens (Human) | R3G1 |
2 | B (B) | Beta-2-microglobulin | polymer | 100 | 11879.4 | 1 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (Human) | |
3 | C (C) | TCR variable DELTA 1 CHAIN and TCR constant Alpha | polymer | 207 | 23186.1 | 1 | Homo sapiens | ||
4 | D (D) | TCR variable BETA 2 (TRVB20) chain and TCR constant BETA | polymer | 245 | 27339.6 | 1 | Homo sapiens | ||
5 | E (E) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
6 | F (F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
7 | G (G) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
8 | H (A) | (15Z)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]tetracos-15-enamide | non-polymer | 828.3 | 1 | Chemie (JLS) | |||
9 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 205 | Chemie (HOH) |
Sequence modifications
A: 6 - 277 (UniProt: P15813)
B: 1 - 99 (UniProt: P61769)
PDB | External Database | Details |
---|---|---|
Pro 278 | - | expression tag |
Arg 279 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 93589.2 | |
Branched | Number of molecules | 3 |
Total formula weight | 1727.6 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 828.3 | |
All* | Total formula weight | 96145.1 |