4WMB

crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese, acceptor ligand and UDP

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	Xyloside xylosyltransferase 1	polymer	306	35295.5	1	UniProt (Q3U4G3) Pfam (PF01501)	Mus musculus (Mouse)	UDP-xylose:alpha-xyloside alpha-1,3-xylosyltransferase
2	B (D)	Coagulation factor IX	polymer	50	5710.2	1	UniProt (P00740) Pfam (PF00008)	Homo sapiens (Human)	Christmas factor,Plasma thromboplastin component,PTC
3	C (B)	alpha-D-xylopyranose-(1-3)-beta-D-glucopyranose	branched		312.3	1	In PDB GlyTouCan (G01629YL)
4	D (A)	MANGANESE (II) ION	non-polymer		54.9	1	Chemie (MN) PubChem (27854)
5	E (A)	URIDINE-5'-DIPHOSPHATE	non-polymer		404.2	1	Chemie (UDP) PubChem (1158) PubChem (6031) PubChem (25323044) PubChem (25323048) PubChem (44298965) PubChem (53486216) PubChem (3084486) PubChem (60098857) PubChem (57448939) PubChem (6101632) PubChem (6604175) PubChem (91746160) PubChem (92332560) PubChem (92332561) PubChem (92332562) PubChem (92332563) PubChem (11811538) PubChem (93088131) PubChem (93630083) PubChem (12049241)
6	F (A)	SULFATE ION	non-polymer		96.1	1	Chemie (SO4)
7	G, H (A, D)	water	water		18.0	71	Chemie (HOH)

Sequence modifications

D: 46 - 84 (UniProt: P00740)

PDB	External Database	Details
Met 43	-	initiating methionine
Asp 44	-	expression tag
Ile 45	-	expression tag
Leu 85	-	expression tag
Glu 86	-	expression tag
His 87	-	expression tag
His 88	-	expression tag
His 89	-	expression tag
His 90	-	expression tag
His 91	-	expression tag
His 92	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	41005.7
Branched	Number of molecules	1
	Total formula weight	312.3
Non-Polymers*	Number of molecules	3
	Total formula weight	555.2
All*	Total formula weight	41873.2

*Water molecules are not included.