4WMA
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese,acceptor ligand and UDP-Glucose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Xyloside xylosyltransferase 1 | polymer | 306 | 35295.5 | 1 | UniProt (Q3U4G3) Pfam (PF01501) | Mus musculus (Mouse) | UDP-xylose:alpha-xyloside alpha-1,3-xylosyltransferase |
| 2 | B (D) | Coagulation factor IX | polymer | 50 | 5710.2 | 1 | UniProt (P00740) Pfam (PF00008) | Homo sapiens (Human) | Christmas factor,Plasma thromboplastin component,PTC |
| 3 | C (B) | alpha-D-xylopyranose-(1-3)-beta-D-glucopyranose | branched | 312.3 | 1 | In PDB GlyTouCan (G01629YL) | |||
| 4 | D (A) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) PubChem (27854) | |||
| 5 | E (A) | URIDINE-5'-DIPHOSPHATE-GLUCOSE | non-polymer | 566.3 | 1 | Chemie (UPG) PubChem (16667381) PubChem (20776702) PubChem (20776703) PubChem (1166) PubChem (16760700) PubChem (439156) PubChem (20776705) PubChem (25011746) PubChem (20776706) PubChem (23724458) PubChem (448801) PubChem (45109771) PubChem (46226441) PubChem (46936243) PubChem (53477679) PubChem (56845790) PubChem (58538034) PubChem (59720988) PubChem (56650783) PubChem (56846106) PubChem (8629) PubChem (18068) PubChem (88869506) PubChem (88869507) PubChem (88869743) PubChem (88870643) PubChem (88883029) PubChem (88910951) PubChem (88941526) PubChem (89321600) PubChem (89360378) PubChem (6857540) PubChem (89847362) PubChem (90056247) PubChem (439158) PubChem (90950359) PubChem (91746280) PubChem (448873) PubChem (640055) PubChem (92974126) PubChem (92974128) PubChem (92974129) PubChem (93535589) PubChem (12133414) PubChem (13008857) PubChem (13987142) PubChem (92328335) PubChem (92974127) PubChem (6857410) PubChem (124933210) PubChem (102429624) PubChem (129850353) PubChem (11734460) PubChem (124933209) PubChem (134736387) PubChem (134736388) PubChem (155893098) PubChem (158571248) PubChem (162920685) PubChem (138911444) PubChem (168265389) PubChem (162920683) PubChem (162920684) PubChem (163626061) PubChem (166642644) PubChem (168720052) PubChem (174027848) | |||
| 6 | F (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 7 | G, H (A, D) | water | water | 18.0 | 135 | Chemie (HOH) |
Sequence modifications
D: 46 - 84 (UniProt: P00740)
| PDB | External Database | Details |
|---|---|---|
| Met 43 | - | initiating methionine |
| Asp 44 | - | expression tag |
| Ile 45 | - | expression tag |
| Leu 85 | - | expression tag |
| Glu 86 | - | expression tag |
| His 87 | - | expression tag |
| His 88 | - | expression tag |
| His 89 | - | expression tag |
| His 90 | - | expression tag |
| His 91 | - | expression tag |
| His 92 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 41005.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 312.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 717.3 | |
| All* | Total formula weight | 42035.3 |
