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4WHQ

Alkylperoxo reaction intermediate trapped in Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 6.5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, D
(A, E, C)
Protocatechuate 3,4-dioxygenase alpha chainpolymer20022278.83UniProt (P00436)
Pfam (PF00775)
Pseudomonas putida3,4-PCD
2C, E, F
(F, D, B)
Protocatechuate 3,4-dioxygenase beta chainpolymer23826696.33UniProt (P00437)
Pfam (PF12391)
Pfam (PF00775)
Pseudomonas putida3,4-PCD
3G, I, W
(A, C)
CHLORIDE IONnon-polymer35.53Chemie (CL)
4AA, BA, CA, H, HA...
(D, A, B, E, F...)
4-fluorobenzene-1,2-diolnon-polymer128.117Chemie (3N8)
5GA, K, Y
(B, F, D)
FE (III) IONnon-polymer55.83Chemie (FE)
6DA, LA, NA, O, OA...
(D, B, F, C)
BETA-MERCAPTOETHANOLnon-polymer78.18Chemie (BME)
7Q, QA, S
(F, B)
BICARBONATE IONnon-polymer61.03Chemie (BCT)
8X
(C)
SULFATE IONnon-polymer96.11Chemie (SO4)
9EA
(D)
SODIUM IONnon-polymer23.01Chemie (NA)
10FA
(D)
GLYCEROLnon-polymer92.11Chemie (GOL)
11RA
(B)
(6S)-4-fluoro-6-hydroperoxy-6-hydroxycyclohexa-2,4-dien-1-onenon-polymer160.11Chemie (3N9)
12SA, TA, UA, VA, WA...
(A, E, F, C, D...)
waterwater18.0891Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight146925.3
Non-Polymers*Number of molecules38
Total formula weight3631.0
All*Total formula weight150556.3
*Water molecules are not included.

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PDB entries from 2025-12-24

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