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4W9H

pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-acetamido-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 7)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D, G, J
(A, D, G, J)
Transcription elongation factor B polypeptide 2polymer10411956.44UniProt (Q15370)
Pfam (PF00240)
Homo sapiens (Human)Elongin 18 kDa subunit,Elongin-B,EloB,RNA polymerase II transcription factor SIII subunit B,SIII p18
2B, E
(B, E)
Transcription elongation factor B polypeptide 1polymer9711078.62UniProt (Q15369)
Pfam (PF03931)
Homo sapiens (Human)Elongin 15 kDa subunit,Elongin-C,EloC,RNA polymerase II transcription factor SIII subunit C,SIII p15
3C, F, I, L
(C, F, I, L)
Von Hippel-Lindau disease tumor suppressorpolymer16218806.34UniProt (P40337)
Pfam (PF01847)
Pfam (PF17211)
Homo sapiens (Human)Protein G7,pVHL
4H, K
(H, K)
Transcription elongation factor B polypeptide 1polymer9710974.62UniProt (Q15369)
Pfam (PF03931)
Homo sapiens (Human)Elongin 15 kDa subunit,Elongin-C,EloC,RNA polymerase II transcription factor SIII subunit C,SIII p15
5M, N, O, P
(C, F, I, L)
N-acetyl-3-methyl-L-valyl-(4R)-4-hydroxy-N-[4-(4-methyl-1,3-thiazol-5-yl)benzyl]-L-prolinamidenon-polymer472.64Chemie (3JF)
6AA, BA, Q, R, S...
(K, L, A, B, C...)
waterwater18.0575Chemie (HOH)
Sequence modifications
B, E: 17 - 112 (UniProt: Q15369)
PDBExternal DatabaseDetails
Met 16-initiating methionine
C, F, I, L: 54 - 213 (UniProt: P40337)
PDBExternal DatabaseDetails
Gly 52-expression tag
Ser 53-expression tag
H, K: 17 - 112 (UniProt: Q15369)
PDBExternal DatabaseDetails
Met 16-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight167157.0
Non-Polymers*Number of molecules4
Total formula weight1890.4
All*Total formula weight169047.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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