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4W90

Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
U1 small nuclear ribonucleoprotein Apolymer9110693.01UniProt (P09012)
Pfam (PF00076)
Homo SapiensU1A
2B
(C)
riboswitch a pseudo-dimeric RNApolymer11938299.71BACILLUS SUBTILIS
3C, D
(C)
(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxidenon-polymer658.42Chemie (2BA)
4E, F, G, H, I
(C)
MAGNESIUM IONnon-polymer24.35Chemie (MG)
Sequence modifications
B: 6 - 96 (UniProt: P09012)
PDBExternal DatabaseDetails
His 31Tyr 31engineered mutation
Arg 36Gln 36engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight48992.7
Non-Polymers*Number of molecules7
Total formula weight1438.3
All*Total formula weight50431.0
*Water molecules are not included.

238268

PDB entries from 2025-07-02

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