4V93

Fitted coordinates for Lumbricus terrestris hemoglobin cryo-EM complex (EMD-2627)

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, DB, EA, F, JA... (A0, A5, AC, AH, AM...)	EXTRACELLULAR GLOBIN-3	polymer	149	16902.4	12	UniProt (P11069) Pfam (PF00042)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)	ERYTHROCRUORIN, EXTRACELLULAR GLOBIN III, GLOBIN C
2	AA, B, EB, FA, G... (A1, A6, AD, AI, AN...)	HEMOGLOBIN CHAIN D1	polymer	140	15988.3	12	UniProt (O61233) Pfam (PF00042)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)
3	AB, BA, BB, C, CA... (A2, A3, A7, AA, AE...)	EXTRACELLULAR GLOBIN-4	polymer	147	17136.6	24	UniProt (P13579) Pfam (PF00042)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)	ERYTHROCRUORIN, GLOBIN A, GLOBIN IV
4	AC, CB, DA, DD, E... (A4, AB, AG, AL, AQ...)	EXTRACELLULAR GLOBIN-2	polymer	145	16268.2	36	UniProt (P02218) Pfam (PF00042)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)	ERYTHROCRUORIN, GLOBIN AIII, GLOBIN B
5	BD, CC, DF, EE, GD... (B0, B5, BC, BH, BM...)	HEMOGLOBIN CHAIN D1	polymer	158	17948.7	24	UniProt (O61233) Pfam (PF00042)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)
6	CD, DC, HD, IC, JB... (B1, B6, BD, BI, BN...)	EXTRACELLULAR GLOBIN-4	polymer	151	17567.0	12	UniProt (P13579) Pfam (PF00042)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)	ERYTHROCRUORIN, GLOBIN A, GLOBIN IV
7	AD, BC, CF, DE, FD... (B4, BB, BG, BL, BQ...)	EXTRACELLULAR GLOBIN-3	polymer	170	19126.1	24	UniProt (P11069) Pfam (PF00042)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)	ERYTHROCRUORIN, EXTRACELLULAR GLOBIN III, GLOBIN C
8	AE, EF, FE, JF, KE... (C0, C5, CC, CH, CM...)	HEMOGLOBIN LINKER CHAIN L1	polymer	240	27460.7	12	UniProt (Q9GV76) Pfam (PF00057) Pfam (PF16915)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)
9	AF, BE, FF, GE, KF... (C1, C6, CD, CI, CN...)	EXTRACELLULAR HEMOGLOBIN LINKER L2 SUBUNIT	polymer	288	32075.5	12	UniProt (Q2I743) Pfam (PF00057) Pfam (PF16915)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)
10	BF, CE, GF, HE, LF... (C2, C7, CE, CJ, CO...)	EXTRACELLULAR HEMOGLOBIN LINKER L3 SUBUNIT	polymer	240	26877.9	12	UniProt (Q2I742) Pfam (PF00057) Pfam (PF16915)	LUMBRICUS TERRESTRIS (COMMON EARTHWORM)

Sequence modifications

A0, A5, AC, AH, AM, AR, AW, Ab, Ag, Al, Aq, Av: 3 - 151 (UniProt: P11069)

PDB	External Database	Details
Glu 49	Asp 66	conflict

A2, A3, A7, AA, AE, AF, AJ, AK, AO, AP, AT, AU, AY, AZ, Ad, Ae, Ai, Aj, An, Ao, As, At, Ax, Ay: 5 - 151 (UniProt: P13579)

PDB	External Database	Details
Lys 78	Asp 78	conflict

A4, AB, AG, AL, AQ, AV, Aa, Af, Ak, Ap, Au, Az, B2, B3, B7, BA, BE, BF, BJ, BK, BO, BP, BT, BU, BY, BZ, Bd, Be, Bi, Bj, Bn, Bo, Bs, Bt, Bx, By: 1 - 145 (UniProt: P02218)

PDB	External Database	Details
Asp 66	Glu 66	conflict

B1, B6, BD, BI, BN, BS, BX, Bc, Bh, Bm, Br, Bw: 1 - 151 (UniProt: P13579)

PDB	External Database	Details
Lys 78	Asp 78	conflict

B4, BB, BG, BL, BQ, BV, Ba, Bf, Bk, Bp, Bu, Bz, C3, CA, CF, CK, CP, CU, CZ, Ce, Cj, Co, Ct, Cy: -16 - 153 (UniProt: P11069)

PDB	External Database	Details
Glu 49	Asp 66	conflict

C2, C7, CE, CJ, CO, CT, CY, Cd, Ci, Cn, Cs, Cx: -17 - 222 (UniProt: Q2I742)

PDB	External Database	Details
Cys 113	Val 131	conflict

Contents of the asymmetric unit

Polymers	Number of chains	180
	Total formula weight	3529191.5
All*	Total formula weight	3529191.5

*Water molecules are not included.