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4V82

Crystal structure of cyanobacterial Photosystem II in complex with terbutryn

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, U
(AA, BA)
Photosystem Q(B) protein 1polymer34438265.62UniProt (P0A444)
Pfam (PF00124)
Thermosynechococcus elongatus32 kDa thylakoid membrane protein 1, Photosystem II protein D1 1
2B, V
(AB, BB)
Photosystem II core light harvesting proteinpolymer51056656.52UniProt (Q8DIQ1)
Pfam (PF00421)
Thermosynechococcus elongatus
3C, W
(AC, BC)
Photosystem II CP43 proteinpolymer46150287.52UniProt (Q8DIF8)
Pfam (PF00421)
Thermosynechococcus elongatus
4D, X
(AD, BD)
Photosystem II D2 proteinpolymer35239388.22UniProt (Q8CM25)
Pfam (PF00124)
Thermosynechococcus elongatusPSII D2 protein, Photosystem Q(A) protein
5E, Y
(AE, BE)
Cytochrome b559 subunit alphapolymer849580.82UniProt (Q8DIP0)
Pfam (PF00283)
Pfam (PF00284)
Thermosynechococcus elongatusPSII reaction center subunit V
6F, Z
(AF, BF)
Cytochrome b559 subunit betapolymer455067.92UniProt (Q8DIN9)
Pfam (PF00283)
Thermosynechococcus elongatusPSII reaction center subunit VI
7AA, G
(AH, BH)
Photosystem II reaction center protein Hpolymer667358.82UniProt (Q8DJ43)
Pfam (PF00737)
Thermosynechococcus elongatusPSII-H
8BA, H
(AI, BI)
Photosystem II reaction center protein Ipolymer384410.22UniProt (Q8DJZ6)
Pfam (PF02532)
Thermosynechococcus elongatusPSII-I, PSII 4.4 kDa protein
9CA, I
(AJ, BJ)
Photosystem II reaction center protein Jpolymer404105.92UniProt (P59087)
Pfam (PF01788)
Thermosynechococcus elongatusPSII-J
10DA, J
(AK, BK)
Photosystem II reaction center protein Kpolymer374101.92UniProt (Q9F1K9)
Pfam (PF02533)
Thermosynechococcus elongatusPSII-K
11EA, K
(AL, BL)
Photosystem II reaction center protein Lpolymer374299.02UniProt (Q8DIN8)
Pfam (PF02419)
Thermosynechococcus elongatusPSII-L, PSII 5 kDa protein
12FA, L
(AM, BM)
Photosystem II reaction center protein Mpolymer363981.72UniProt (Q8DHA7)
Pfam (PF05151)
Thermosynechococcus elongatusPSII-M
13GA, M
(AO, BO)
Photosystem II manganese-stabilizing polypeptidepolymer24726923.02UniProt (P0A431)
Pfam (PF01716)
Thermosynechococcus elongatusMSP
14HA, N
(AT, BT)
Photosystem II reaction center protein Tpolymer323878.72UniProt (Q8DIQ0)
Pfam (PF01405)
Thermosynechococcus elongatusPSII-T, PSII-Tc
15IA, O
(AU, BU)
Photosystem II 12 kDa extrinsic proteinpolymer10411656.02UniProt (Q9F1L5)
Pfam (PF06514)
Thermosynechococcus elongatusPS II complex 12 kDa extrinsic protein, PSII-U
16JA, P
(AV, BV)
Cytochrome c-550polymer13715148.32UniProt (P0A386)
Pfam (PF14495)
Thermosynechococcus elongatusCytochrome c-549, Cytochrome c550, Low-potential cytochrome c
17KA, Q
(Ay, By)
Photosystem II reaction center protein ycf12polymer465039.12UniProt (Q8DJI1)
Pfam (PF05969)
Thermosynechococcus elongatus
18LA, R
(AX, BX)
Photosystem II reaction center X proteinpolymer414322.22UniProt (Q9F1R6)
Pfam (PF06596)
Thermosynechococcus elongatus
19MA, S
(AY, BY)
PHOTOSYSTEM II PSBX PROTEINpolymer282401.02THERMOSYNECHOCOCCUS ELONGATUS
20NA, T
(AZ, BZ)
Photosystem II reaction center protein Zpolymer626766.22UniProt (Q8DHJ2)
Pfam (PF01737)
Thermosynechococcus elongatusPSII-Z
21OA, VG
(AA, BD)
FE (II) IONnon-polymer55.82Chemie (FE2)
22JE, PA
(BA, AA)
BICARBONATE IONnon-polymer61.02Chemie (BCT)
23KE, QA
(BA, AA)
CHLORIDE IONnon-polymer35.52Chemie (CL)
24AF, AG, BF, BG, CF...
(BB, BC, AD, AB, AC...)
CHLOROPHYLL Anon-polymer893.570Chemie (CLA)
25PE, VA
(BA, AA)
2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINEnon-polymer241.42Chemie (MST)
26QE, WA
(BA, AA)
OXYGEN EVOLVING SYSTEMnon-polymer323.82Chemie (OEC)
27BH, CE, GE, JD, MG...
(BD, AT, AX, AD, BC...)
BETA-CAROTENEnon-polymer536.924Chemie (BCR)
28AD, BD, GC, HH, LH...
(AC, AB, BE, BH, AE...)
DIGALACTOSYL DIACYL GLYCEROL (DGDG)non-polymer949.314Chemie (DGD)
29CB, TE, VE, ZA
(AA, BA)
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLEnon-polymer723.04Chemie (LHG)
30AB, AC, DB, FC, HE...
(AA, AB, BA, BF, AF...)
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLnon-polymer795.110Chemie (SQD)
31BB, CD, CH, DD, DH...
(AA, AC, BD, BE, BA...)
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDEnon-polymer787.222Chemie (LMG)
32AE, BC, CC, FH, HC...
(AM, AB, BD, AD, BI...)
DODECYL-BETA-D-MALTOSIDEnon-polymer510.616Chemie (LMT)
33DC, DE, EC, FE, XF...
(AB, AU, AV, BB, BV)
DIMETHYL SULFOXIDEnon-polymer78.18Chemie (DMS)
34FD, GD, XG, YG
(AD, BD)
PHEOPHYTIN Anon-polymer871.24Chemie (PHO)
35AH, ID
(BD, AD)
2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEnon-polymer749.22Chemie (PL9)
36EE, IH, OD, WH
(AV, BF, AF, BV)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.54Chemie (HEM)
37BE, KH, PH, QD, UH...
(AO, BF, BK, AF, BO...)
CALCIUM IONnon-polymer40.16Chemie (CA)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains40
Total formula weight607277.1
Non-Polymers*Number of molecules194
Total formula weight134799.4
All*Total formula weight742076.5
*Water molecules are not included.

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PDB entries from 2025-12-24

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