4V6U
Promiscuous behavior of proteins in archaeal ribosomes revealed by cryo-EM: implications for evolution of eukaryotic ribosomes
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (AQ) | 30S ribosomal protein S15P/S13e | polymer | 158 | 18640.0 | 1 | UniProt (Q8TZD9) Pfam (PF08069) Pfam (PF00312) | Pyrococcus furiosus | 30S ribosomal protein S15 |
| 2 | B (AK) | 30S ribosomal protein S9P | polymer | 135 | 15317.9 | 1 | UniProt (Q8U0E7) Pfam (PF00380) | Pyrococcus furiosus | 30S ribosomal protein S9 |
| 3 | C (AI) | 30S ribosomal protein S8P | polymer | 130 | 14684.2 | 1 | UniProt (Q8U014) Pfam (PF00410) | Pyrococcus furiosus | 30S ribosomal protein S8 |
| 4 | D (AG) | 30S ribosomal protein S6e | polymer | 125 | 14002.3 | 1 | UniProt (Q8U3H8) Pfam (PF01092) | Pyrococcus furiosus | |
| 5 | E (AW) | 30S ribosomal protein S27e | polymer | 63 | 6888.4 | 1 | UniProt (Q8U474) Pfam (PF01667) | Pyrococcus furiosus | |
| 6 | F (AC) | 30S ribosomal protein S3P | polymer | 210 | 23464.4 | 1 | UniProt (Q8U004) Pfam (PF07650) Pfam (PF00189) | Pyrococcus furiosus | 30S ribosomal protein S3 |
| 7 | G (AB) | 30S ribosomal protein S2P | polymer | 202 | 23039.9 | 1 | UniProt (Q8U0F0) Pfam (PF00318) | Pyrococcus furiosus | 30S ribosomal protein S2 |
| 8 | H (AR) | 30S ribosomal protein S17P | polymer | 113 | 13296.5 | 1 | UniProt (Q8U008) Pfam (PF00366) | Pyrococcus furiosus | 30S ribosomal protein S17 |
| 9 | I (A9) | unknown 30S ribosomal protein SX | polymer | 57 | 4869.0 | 1 | Pyrococcus furiosus | ||
| 10 | J (AD) | 30S ribosomal protein S4P | polymer | 180 | 21381.9 | 1 | UniProt (P61993) Pfam (PF00163) Pfam (PF01479) | Pyrococcus furiosus | 30S ribosomal protein S4 |
| 11 | K (A1) | E-tRNA | polymer | 77 | 24880.9 | 1 | Pyrococcus furiosus | ||
| 12 | L (AN) | 30S ribosomal protein S12P | polymer | 147 | 16477.6 | 1 | UniProt (P61995) Pfam (PF00164) | Pyrococcus furiosus | 30S ribosomal protein S12 |
| 13 | M (AX) | 30S ribosomal protein S28e | polymer | 71 | 8116.3 | 1 | UniProt (Q8U159) Pfam (PF01200) | Pyrococcus furiosus | |
| 14 | N (AM) | 30S ribosomal protein S11P | polymer | 137 | 14757.0 | 1 | UniProt (Q8U0E3) Pfam (PF00411) | Pyrococcus furiosus | 30S ribosomal protein S11 |
| 15 | O (AE) | 30S ribosomal protein S4e | polymer | 243 | 28197.0 | 1 | UniProt (Q8U011) Pfam (PF01479) Pfam (PF00900) Pfam (PF08071) | Pyrococcus furiosus | |
| 16 | P (AJ) | 30S ribosomal protein S8e | polymer | 127 | 14293.7 | 1 | UniProt (Q8U1Y5) Pfam (PF01201) | Pyrococcus furiosus | |
| 17 | Q (AO) | 30S ribosomal protein S13P | polymer | 148 | 16948.9 | 1 | UniProt (Q8U0E2) Pfam (PF00416) | Pyrococcus furiosus | 30S ribosomal protein S13 |
| 18 | R (AF) | 30S ribosomal protein S5P | polymer | 236 | 26590.9 | 1 | UniProt (Q8U017) Pfam (PF00333) Pfam (PF03719) | Pyrococcus furiosus | PfS5, 30S ribosomal protein S5 |
| 19 | S (AS) | 30S ribosomal protein S17e | polymer | 67 | 7942.5 | 1 | UniProt (Q8U0U1) Pfam (PF00833) | Pyrococcus furiosus | |
| 20 | BB, OB, T (A3, BG, B4) | 50S ribosomal protein L7Ae | polymer | 123 | 13414.7 | 3 | UniProt (Q8U160) Pfam (PF01248) | Pyrococcus furiosus | 30S ribosomal protein L8e(S) |
| 21 | U (A2) | 16S rRNA | polymer | 1495 | 485455.5 | 1 | Pyrococcus furiosus | ||
| 22 | V (AY) | 30S ribosomal protein S27ae | polymer | 50 | 5865.0 | 1 | UniProt (Q8U443) Pfam (PF01599) | Pyrococcus furiosus | 30S ribosomal protein S31e |
| 23 | W (AT) | 30S ribosomal protein S19P | polymer | 132 | 15357.4 | 1 | UniProt (Q8U002) Pfam (PF00203) | Pyrococcus furiosus | 30S ribosomal protein S19 |
| 24 | X (AA) | 30S ribosomal protein S3Ae | polymer | 198 | 22984.1 | 1 | UniProt (Q8TZE1) Pfam (PF01015) | Pyrococcus furiosus | 30S ribosomal protein S1e |
| 25 | Y (AH) | 30S ribosomal protein S7P | polymer | 215 | 24701.8 | 1 | UniProt (Q8U0M8) Pfam (PF00177) | Pyrococcus furiosus | 30S ribosomal protein S7 |
| 26 | Z (AP) | 30S ribosomal protein S14P type Z | polymer | 56 | 6634.0 | 1 | UniProt (Q8U013) Pfam (PF00253) | Pyrococcus furiosus | 30S ribosomal protein S14 |
| 27 | AA (A0) | P-tRNA | polymer | 76 | 24538.6 | 1 | Pyrococcus furiosus | ||
| 28 | BA, HB (AV, B6) | 30S ribosomal protein S24e | polymer | 99 | 11698.6 | 2 | UniProt (Q8U442) Pfam (PF01282) | Pyrococcus furiosus | |
| 29 | CA (AL) | 30S ribosomal protein S10P | polymer | 102 | 11769.7 | 1 | UniProt (P61885) Pfam (PF00338) | Pyrococcus furiosus | 30S ribosomal protein S10 |
| 30 | DA (AU) | SSU ribosomal protein S19E | polymer | 150 | 17394.2 | 1 | UniProt (Q8U0T4) Pfam (PF01090) | Pyrococcus furiosus | 30S ribosomal protein S19e |
| 31 | EA (BY) | 50S ribosomal protein L30P | polymer | 155 | 17745.0 | 1 | UniProt (Q9HH78) Pfam (PF00327) | Pyrococcus furiosus | PfL30, 50S ribosomal protein L30 |
| 32 | FA (BO) | 50S ribosomal protein L18P | polymer | 203 | 23233.9 | 1 | UniProt (Q9HH80) Pfam (PF17144) | Pyrococcus furiosus | PfL18, 50S ribosomal protein L18 |
| 33 | GA (BC) | 50S ribosomal protein L3P | polymer | 365 | 41466.0 | 1 | UniProt (Q8TZZ8) Pfam (PF00297) | Pyrococcus furiosus | 50S ribosomal protein L3 |
| 34 | HA, WA (B5, BK) | 50S ribosomal protein L14e | polymer | 83 | 8979.7 | 2 | UniProt (Q8U2L5) Pfam (PF00467) | Pyrococcus furiosus | |
| 35 | IA (BL) | 50S ribosomal protein L15P | polymer | 147 | 16439.3 | 1 | UniProt (Q8U018) Pfam (PF00828) | Pyrococcus furiosus | 50S ribosomal protein L15 |
| 36 | JA (Bf) | 50S ribosomal protein L39e | polymer | 51 | 6323.8 | 1 | UniProt (Q8U3S6) Pfam (PF00832) | Pyrococcus furiosus | |
| 37 | KA (BU) | 50S ribosomal protein L24P | polymer | 121 | 14365.0 | 1 | UniProt (Q8U010) Pfam (PF16906) Pfam (PF00467) | Pyrococcus furiosus | 50S ribosomal protein L24 |
| 38 | LA (Bb) | 50S ribosomal protein L32e | polymer | 130 | 15576.6 | 1 | UniProt (Q9HH82) Pfam (PF01655) | Pyrococcus furiosus | PfeL32 |
| 39 | MA (Be) | 50S ribosomal protein L37e | polymer | 62 | 7245.6 | 1 | UniProt (Q8U0P5) Pfam (PF01907) | Pyrococcus furiosus | |
| 40 | NA (BE) | 50S ribosomal protein L5P | polymer | 186 | 21269.9 | 1 | UniProt (Q8U012) Pfam (PF00281) Pfam (PF00673) | Pyrococcus furiosus | 50S ribosomal protein L5 |
| 41 | OA (Ba) | 50S ribosomal protein L31e | polymer | 95 | 11083.2 | 1 | UniProt (Q8U3S7) Pfam (PF01198) | Pyrococcus furiosus | |
| 42 | PA (BT) | 50S ribosomal protein L23P | polymer | 86 | 9893.7 | 1 | UniProt (Q8U000) Pfam (PF00276) | Pyrococcus furiosus | 50S ribosomal protein L23 |
| 43 | QA (Bk) | Acidic ribosomal protein P0 homolog | polymer | 339 | 37167.0 | 1 | UniProt (Q8TZJ8) Pfam (PF00466) Pfam (PF17777) | Pyrococcus furiosus | L10E, 50S ribosomal protein P0 |
| 44 | RA (BW) | 50S ribosomal protein L29P | polymer | 72 | 8549.3 | 1 | UniProt (Q8U005) Pfam (PF00831) | Pyrococcus furiosus | 50S ribosomal protein L29 |
| 45 | SA (Bi) | 50S ribosomal protein L37Ae | polymer | 83 | 8956.7 | 1 | UniProt (Q8TZI4) Pfam (PF01780) | Pyrococcus furiosus | 50S ribosomal protein L43e |
| 46 | TA (BA) | 50S ribosomal protein L1P | polymer | 216 | 23893.1 | 1 | UniProt (Q8TZJ9) Pfam (PF00687) | Pyrococcus furiosus | 50S ribosomal protein L1 |
| 47 | UA (BI) | 50S ribosomal protein L13P | polymer | 142 | 16345.4 | 1 | UniProt (Q8U0E6) Pfam (PF00572) | Pyrococcus furiosus | 50S ribosomal protein L13 |
| 48 | VA (BR) | 50S ribosomal protein L21e | polymer | 97 | 11371.4 | 1 | UniProt (Q8U217) Pfam (PF01157) | Pyrococcus furiosus | |
| 49 | XA (BQ) | 50S ribosomal protein L19e | polymer | 150 | 17920.6 | 1 | UniProt (Q8U016) Pfam (PF01280) | Pyrococcus furiosus | PfeL19 |
| 50 | YA (BV) | 50S ribosomal protein L24e | polymer | 66 | 7938.3 | 1 | UniProt (Q8U158) Pfam (PF01246) | Pyrococcus furiosus | |
| 51 | ZA (Bj) | 50S ribosomal protein L44E | polymer | 94 | 11234.4 | 1 | UniProt (Q8U475) Pfam (PF00935) | Pyrococcus furiosus | |
| 52 | AB (BB) | 50S ribosomal protein L2P | polymer | 239 | 26085.4 | 1 | UniProt (Q8U001) Pfam (PF00181) Pfam (PF03947) | Pyrococcus furiosus | 50S ribosomal protein L2 |
| 53 | CB (BD) | 50S ribosomal protein L4P | polymer | 255 | 28765.8 | 1 | UniProt (Q8TZZ9) Pfam (PF00573) | Pyrococcus furiosus | 50S ribosomal protein L4 |
| 54 | DB (BF) | 50S ribosomal protein L6P | polymer | 184 | 20891.2 | 1 | UniProt (Q8U015) Pfam (PF00347) | Pyrococcus furiosus | 50S ribosomal protein L6 |
| 55 | EB (Bh) | 50S ribosomal protein L41e | polymer | 24 | 3277.1 | 1 | UniProt (Q8U232) | Pyrococcus furiosus | |
| 56 | FB (BH) | 50S ribosomal protein L11P | polymer | 164 | 17657.6 | 1 | UniProt (Q8TZK0) Pfam (PF03946) Pfam (PF00298) | Pyrococcus furiosus | 50S ribosomal protein L11 |
| 57 | GB (BZ) | 50S ribosomal protein L30e | polymer | 99 | 10727.6 | 1 | UniProt (Q8U0M6) Pfam (PF01248) | Pyrococcus furiosus | |
| 58 | IB (BP) | 50S ribosomal protein L18e | polymer | 120 | 13758.0 | 1 | UniProt (Q8U0E5) Pfam (PF17135) | Pyrococcus furiosus | |
| 59 | JB (BM) | 50S ribosomal protein L15e | polymer | 194 | 22644.9 | 1 | UniProt (Q8U2F9) Pfam (PF00827) | Pyrococcus furiosus | |
| 60 | KB (BS) | 50S ribosomal protein L22P | polymer | 155 | 17679.8 | 1 | UniProt (Q8U003) Pfam (PF00237) | Pyrococcus furiosus | 50S ribosomal protein L22 |
| 61 | LB (Bd) | 50S ribosomal protein L34e | polymer | 89 | 10677.1 | 1 | UniProt (Q8U2L3) Pfam (PF01199) | Pyrococcus furiosus | |
| 62 | MB (BN) | 50S ribosomal protein L10e | polymer | 181 | 20974.4 | 1 | UniProt (Q9UWP5) Pfam (PF00252) | Pyrococcus furiosus | 50S ribosomal protein L16 |
| 63 | NB (Bg) | 50S ribosomal protein L40e | polymer | 51 | 5858.1 | 1 | UniProt (Q8U0V6) | Pyrococcus furiosus | |
| 64 | PB (Bc) | 50S ribosomal protein L35Ae | polymer | 87 | 9755.6 | 1 | UniProt (Q8TZV6) Pfam (PF01247) | Pyrococcus furiosus | 50S ribosomal protein L33e |
| 65 | QB (BJ) | 50S ribosomal protein L14P | polymer | 141 | 15264.9 | 1 | UniProt (Q8U009) Pfam (PF00238) | Pyrococcus furiosus | 50S ribosomal protein L14 |
| 66 | RB (Bl) | 50S ribosomal protein LX | polymer | 77 | 9350.0 | 1 | UniProt (Q8U3S9) Pfam (PF01775) | Pyrococcus furiosus | |
| 67 | SB (B1) | 23S rRNA | polymer | 3049 | 990820.4 | 1 | Pyrococcus furiosus | ||
| 68 | TB (B3) | 5S rRNA | polymer | 126 | 40689.3 | 1 | Pyrococcus furiosus |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 72 |
| Total formula weight | 2602985.2 | |
| All* | Total formula weight | 2602985.2 |
